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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:02:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Homo sapiens genomic DNA, chromosome 11 clone:RP11-121L10, complete sequence.
AP002364.4:142108-142127
CCTTGACTTTAAGGAGCTTTTTAGTTTAGT142108GAGAGAGACAAACAAGTGAATTGGAAATTATGATACAGTGAGAAAAGTGG
Homo sapiens DNA, chromosome 11, nearly complete genome.
AP023471.1:85886766-85886785
CCTTGACTTTAAGGAGCTTTTTAGTTTAGT85886766GAGAGAGACAAACAAGTGAATTGGAAATTATGATACAGTGAGAAAAGTGG
Homo sapiens isolate CHM13 chromosome 11.
CP068267.2:90263584-90263603
CCTTGACTTTAAGGAGCTTTTTAGTTTAGT90263584GAGAGAGACAAACAAGTGAATTGGAAATTATGATACAGTGAGAAAAGTGG
Homo sapiens isolate NA24385 chromosome 11.
CP139532.1:90391432-90391451
CCTTGACTTTAAGGAGCTTTTTAGTTTAGT90391432GAGAGAGACAAACAAGTGAATTGGAAATTATGATACAGTGAGAAAAGTGG
Homo sapiens isolate NA24385 chromosome 11.
CP139555.1:89167107-89167126
CCTTGACTTTAAGGAGCTTTTTAGTTTAGT89167107GAGAGAGACAAACAAGTGAATTGGAAATTATGATACAGTGAGAAAAGTGG
Danio rerio strain T5D chromosome 17.
CP068751.1:23374556-23374575
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA23374556GAGAGAGACAAACAAGTGAACATAAAAAATACATTTAAGAGTTGCTTTGT
Danio rerio strain Tubingen chromosome 17.
CP137030.2:24772611-24772630
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA24772611GAGAGAGACAAACAAGTGAACATAAAAAATACATTTAAAAGTTGCTTTGT
Danio rerio genome assembly, chromosome: 17.
LR812079.1:24291916-24291935
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA24291916GAGAGAGACAAACAAGTGAACATAAAAAATACATTTAAGAGTTGCTTTGT
Danio rerio strain Cooch Behar (CB) genome assembly, chromosome: 17.
LR812560.1:20454546-20454565
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA20454546GAGAGAGACAAACAAGTGAACATAAAAAATACATTTAAAAGTTGCTTTGT
Danio rerio strain Nadia (NA) genome assembly, chromosome: 17.
LR812585.1:24671747-24671766
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA24671747GAGAGAGACAAACAAGTGAACATAAAAAATACATTTAAAAGTTGCTTTGT
Danio rerio genome assembly, chromosome: 17.
OX063306.1:24685666-24685685
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA24685666GAGAGAGACAAACAAGTGAACATAAAAAATACATTTAAGAGTTGCTTTGT
Eukaryotic synthetic construct chromosome 11.
CP034489.1:90016435-90016454
CCTTGACTTTAAGGAGCTTTTTAGTTTAGT90016435GAGAGAGACAAACAAGTGAATTGGAAATTATGATACAGTGAGAAAAGTGG
Eukaryotic synthetic construct chromosome 11.
CP034514.1:90016435-90016454
CCTTGACTTTAAGGAGCTTTTTAGTTTAGT90016435GAGAGAGACAAACAAGTGAATTGGAAATTATGATACAGTGAGAAAAGTGG
Pm_0907 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW869481.1:34-53
GACATAAAGAGAGGGAGAGAGAGAGAGAGA34GAGAGAGACAAACAAGTGAAACAGAAAGTTGAAGTTTCCTCTTATCTCTG
Camelina hispida cultivar hispida voucher DAO 902780 chromosome 4.
CP094634.1:6215581-6215600
CTAAAAAAACTCAAATTAAAATTACAGAGG6215581GAGAGAGACAAACAAGTGAAGAGAATCTCAAATATCTTCTAATTAGAGAA
Camelina sativa cultivar CO46 chromosome 5.
CP131554.1:5413272-5413291
ACTAAAAACTCAAAATTAAAATTACAGTGA5413272GAGAGAGACAAACAAGTGAAGAGAATCTCAAATATCTTCTAATTAGAGAA
Prunus mume strain gojrou clone P13 SSR marker genomic sequence.
GU458014.1:1-20
1GAGAGAGACAAACAAGTGAAACTTCAAGTTGAAGTTTCCTCTTCTCTCTG
Prunus mume strain gojrou clone P14 SSR marker genomic sequence.
GU458015.1:1-20
1GAGAGAGACAAACAAGTGAAACTTCAAGTTGAAGTTTCCTCTTCTCTCTG
Prunus americana strain chibangzi clone A31 SSR marker genomic sequence.
GU458032.1:1-20
1GAGAGAGACAAACAAGTGAAACAGTAAGTTGAAGTTTCCTCTTCTCTCTG
Prunus americana strain kuhehonglian clone A32 SSR marker genomic sequence.
GU458033.1:1-20
1GAGAGAGACAAACAAGTGAAACAGAAAGTTGAAGTTTCCTCTTCTCTCTG
Xiphydria camelus genome assembly, chromosome: 7.
OY783197.1:26716348-26716367
GGGGGACGGAAAGAGAGAGAGAGACAGAGG26716348GAGAGAGACAAACAAGTGAATAAGTGTAAGTTGGATCCAGGGCCGTAATT
Onychomys arenicola genome assembly, chromosome: 1.
OX460347.1:97089868-97089887
ATAACAAATATTTCTTTCTATCCTCTCTGT97089868TTCACTTGTTTGTCTCTCTCTTTCTATGTGTCCACATCTGTTTCTTCTTT
Onychomys arenicola genome assembly, chromosome: 1.
OX460442.1:86862269-86862288
ATAACAAATATTTCTTTCTATCCTCTCTGT86862269TTCACTTGTTTGTCTCTCTCTTTCTATGTGTCCACATCTGTTTCTTCTTT
Zebrafish DNA sequence from clone CH211-282E3 in linkage group 17.
BX539322.7:17869-17888
ACAAAGCAACTTTTAAATGTATTTTTTATG17869TTCACTTGTTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
Zebrafish DNA sequence from clone DKEY-28J9 in linkage group 17.
BX649437.8:150344-150363
ACAAAGCAACTCTTAAATGTATTTTTTATG150344TTCACTTGTTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
Bufo bufo genome assembly, chromosome: 9.
LR991675.1:29628150-29628169
AATGATAGATCCGTTGGAATCTATGTATTT29628150TTCACTTGTTTGTCTCTCTCTTGTTTTTATGCCTTTTTTTATGGAGCAAT
Silurus aristotelis genome assembly, chromosome: 25.
OX327777.1:16443256-16443275
GTGTGTGTGTGTGTTCCTTGTTTCCTCTTC16443256TTCACTTGTTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
Symphodus melops genome assembly, chromosome: 17.
OX393541.1:20862716-20862735
TCTTCTCTTTTCTCTTTCCTCTCTGTGACT20862716TTCACTTGTTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTTTTTC
Ipomoea triloba cultivar NCNSP0323 chromosome 11.
CP025670.1:25610688-25610707
TCCCACACCTCCTCCCAAACCTGGTACCTC25610688TTCACTTGTTTGTCTCTCTCATACCAGTACTCCTAATACTTGGATACTGG
Camelina sativa cultivar CO46 chromosome 4.
CP131553.1:28066197-28066216
TTCTCTAATTAGAAGAAATTTGAGATTCTC28066197TTCACTTGTTTGTCTCTCTCTCACTGTAATTTTAAATTTGAGTTTTTAGT
Coremacera marginata genome assembly, chromosome: 1.
OU612043.1:215435180-215435199
ATTCAAAGTGTTAATAATACTTTTTGCAAT215435180TTCACTTGTTTGTCTCTCTCGATTTGTATAGAAAGTTTTTTTGGCATCCT
Thysanoteuthis rhombus genome assembly, chromosome: 4.
OY735201.1:54106752-54106771
CGACTAATTATCAATCTTGTCGTCTCTCAT54106752TTCACTTGTTTGTCTCTCTCTCTTTTGATTCTATAATTATGTTTCTTTTC
Rhagium mordax genome assembly, chromosome: 2.
OY796657.1:59670587-59670606
ATCCCAGCCGTTGAATTCGGTACTAAAATT59670587TTCACTTGTTTGTCTCTCTCCTGCATTAATTTACTATCAGAATCCACAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGAGAGACAAACAAGTGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGAGAGACAAACAAGTGAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.282 | 0.273 | search_plus_done; http://172.18.8.135:50400/match?q=GAGAGAGACAAACAAGTGAA&k=0&no_gap=0&offset=0&limit=50
0.418 | 0.136 | search_minus_done; http://172.18.8.135:50400/match?q=TTCACTTGTTTGTCTCTCTC&k=0&no_gap=0&offset=0&limit=29
0.426 | 0.008 | cgi_end;

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