GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 10:25:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Globicephala melas genome assembly, chromosome: 21.
OY734060.1:7304752-7304771
GACCCCTTGGCGTTTCCAGCTGTGAACTAA7304752GAGAGCACCAGCCAGGATAGACAGTGCCAGCTCCGTCAGAGCTGCTCAAA
Orcinus orca genome assembly, chromosome: 21.
OW443381.1:27957793-27957812
TTGGAGCAGCTCTGACGGAGCTGGCACCGT27957793CTATCCTGGCTGGTGCTCTCTTAGTTCACGGCTGGAAACGCCAAGGTGTC
Eptesicus nilssonii genome assembly, chromosome: 17.
OX621296.1:28008316-28008335
GGGGATTTGGCTTCCCCTGGATGGAGACAG28008316CTATCCTGGCTGGTGCTCTCAGGGTCTGTGGTCAGCGAACCTCTCGGGGG
KS16052A10 KS16 Capsicum annuum cDNA, mRNA sequence.
GD074296.1:567-586
CTGGACAAGTCAAGATACGACCAAGAAGGA567CTATCCTGGCTGGTGCTCTCAACTGGGCTCAACCCAAGACTCTCGTTCAA
KS17037E01 KS17 Capsicum annuum cDNA, mRNA sequence.
GD078970.1:202-221
CTGGACAAGTCAAGATACGACCAAGAAGGA202CTATCCTGGCTGGTGCTCTCAACTGGGCTCAACCCAAGACTCTCGTTCAA
TSA: Capsicum annuum MGMT_Contig48327 mRNA sequence.
JW098571.1:101-120
CTGGACAAGTCAAGATACGACCAAGAAGGA101CTATCCTGGCTGGTGCTCTCAACTGGGCTCAACCCAAGACTCTCGTTCAA
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:13353236-13353255
CTGGACAAGTCAAGATACGACCAAGAAGGA13353236CTATCCTGGCTGGTGCTCTCAACTGGGCTCAACCCAAGACTCTCGTTCAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:13818847-13818866
CTGGACAAGTCAAGATACGACCAAGAAGGA13818847CTATCCTGGCTGGTGCTCTCAACTGGGCTCAACCCAAGACTCTCGTTCAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGAGCACCAGCCAGGATAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGAGCACCAGCCAGGATAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=GAGAGCACCAGCCAGGATAG&k=0&no_gap=0&offset=0&limit=50
0.359 | 0.252 | search_minus_done; http://172.18.8.135:50400/match?q=CTATCCTGGCTGGTGCTCTC&k=0&no_gap=0&offset=0&limit=49
0.363 | 0.005 | cgi_end;

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