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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:01:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sus scrofa scrofa breed NS chromosome 13.
CP071564.1:12420725-12420743
TAACAGCTCTGCTATTGAATACCTAGGTGG12420725GAGAGCACCAGTGCAGCAGGTCCTTTGTGATTCTGTCTGACAATCTGGG
Pipistrellus pygmaeus genome assembly, chromosome: 8.
OX465310.1:1642215-1642233
AGAACAACAACAACAAGTGTCCAGACCAGT1642215GAGAGCACCAGTGCAGCAGCAGACACGCAGGTCCGTCTGTCTGGTGAGG
Pipistrellus nathusii genome assembly, chromosome: 8.
OY882865.1:1678830-1678848
ACAAGAATAACAACAAGTGCCCAGACCAGT1678830GAGAGCACCAGTGCAGCAGCAGACACGCAGGTCCGTCTGTCCGGTAAGG
Pipistrellus nathusii genome assembly, chromosome: 8.
OY883185.1:1700221-1700239
ACAAGAATAACAACAAGTGCCCAGACCAGT1700221GAGAGCACCAGTGCAGCAGCAGACACGCAGGTCCGTCTGTCCGGTAAGG
Sus scrofa genome assembly, chromosome: 13.
OY997220.1:25888357-25888375
TAACAGCTCTGCTATTGAATACCTAGGTGG25888357GAGAGCACCAGTGCAGCAGGTCCTTTGTGATTCTGTCTGACAATCTGGG
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-392J16.
FP012232.2:69363-69381
TAACAGCTCTGCTATTGAATACCTAGGTGG69363GAGAGCACCAGTGCAGCAGGTCCTTTGTGATTCTGTCTGACAATCTGGG
Triticum aestivum genome assembly, chromosome: 3B.
LR862515.1:414696090-414696108
AATATGGGTGCAGTAGGGTTGGCATCTTCA414696090GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
LR862536.1:404916573-404916591
AATATGGGTGCAGTAGGGTTGGCATCTTCA404916573GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
LR862557.1:435445646-435445664
AATATGGGTGCAGTAGGGTTGGCATCTTCA435445646GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
LR865465.1:410739418-410739436
AATATGGGTGCAGTAGGGTTGGCATCTTCA410739418GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
LR865486.1:401998743-401998761
AATATGGGTGCAGTAGGGTTGGCATCTTCA401998743GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
LR865507.1:409639324-409639342
AATATGGGTGCAGTAGGGTTGGCATCTTCA409639324GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
LR865746.1:413696680-413696698
AATATGGGTGCAGTAGGGTTGGCATCTTCA413696680GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
LR865767.1:399900348-399900366
AATATGGGTGCAGTAGGGTTGGCATCTTCA399900348GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
LR877316.1:408969211-408969229
AATATGGGTGCAGTAGGGTTGGCATCTTCA408969211GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
LR878442.1:404353527-404353545
AATATGGGTGCAGTAGGGTTGGCATCTTCA404353527GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
LS992087.1:391262380-391262398
AATATGGGTGCAGTAGGGTTGGCATCTTCA391262380GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum turgidum subsp. durum genome assembly, chromosome: 3B.
LT934116.1:394896334-394896352
AATATGGGTGCAGTAGGGTTGGCATCTTCA394896334GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
OU015728.1:414682474-414682492
AATATGGGTGCAGTAGGGTTGGCATCTTCA414682474GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
OU343178.1:415758810-415758828
AATATGGGTGCAGTAGGGTTGGCATCTTCA415758810GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
OU963879.1:404924418-404924436
AATATGGGTGCAGTAGGGTTGGCATCTTCA404924418GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
OV100744.1:408626234-408626252
AATATGGGTGCAGTAGGGTTGGCATCTTCA408626234GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Triticum aestivum genome assembly, chromosome: 3B.
OW530317.1:408626234-408626252
AATATGGGTGCAGTAGGGTTGGCATCTTCA408626234GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Arabidopsis thaliana genome assembly, chromosome: 3.
OX461162.1:13747369-13747387
AGTGGCAGTAGTACAGCCGGCGGTGCAGCA13747369GAGAGCACCAGTGCAGCAGGGAGTGCAACAGTTAGCACATATTGCAGCG
Triticum aestivum genome assembly, chromosome: 3B.
OX637232.1:348487200-348487218
AATATGGGTGCAGTAGGGTTGGCATCTTCA348487200GAGAGCACCAGTGCAGCAGGCACAACCCGAGGTTTGACCTTGGACTTGA
Ectemnius continuus genome assembly, chromosome: 14.
OU342868.1:5573158-5573176
AGTTTACGCACGTAGGCGTAGGCGAATCGC5573158GAGAGCACCAGTGCAGCAGCGTTCCACGGTCCAGCAGCTCCGGCAGCTG
Sepiola atlantica genome assembly, chromosome: 6.
OY744520.1:36168630-36168648
GTTGGGTTGGTCAGGGATACTTACGTCGTA36168630GAGAGCACCAGTGCAGCAGGTTCGTCGGAGTACTTTCAATTGAAATAGT
Pipistrellus pipistrellus genome assembly, chromosome: 8.
LR862364.1:81979058-81979076
CCTCACCGGACAGACGGACCTGCGTGTCTG81979058CTGCTGCACTGGTGCTCTCACTGGTCTGGACACTTGTTGTTGTTCTTGT
Falco punctatus genome assembly, chromosome: 10.
OY723443.1:381239-381257
GTGCAGAAAGGGGTGGCTGTTTATGCTGAA381239CTGCTGCACTGGTGCTCTCTGAAGGGCTCTGGTGTGGTGGGTGCGCAGT
Porphyra yezoensis cDNA, clone:PFL008a08_r, 5'end.
AU190842.1:373-391
GGGCCCGCTCCGCGACCGCGGCCGCCCTTG373CTGCTGCACTGGTGCTCTCCCCCGCCGCCCTGCCGACGCTCCAGGTGGG
Porphyra yezoensis cDNA, clone:PFL094g02_r, 5'end.
AU196781.1:383-401
GGGCCCGCTCCGCGACCGCGGCCGCCCTTG383CTGCTGCACTGGTGCTCTCCCCCGCCGCCCTGCCGACGCTCCAGGTGGG
Porphyra yezoensis cDNA, clone:PFL095h09_r, 5'end.
AU196855.1:383-401
GGGCCCGCTCCGCGACCGCGGCCGCCCTTG383CTGCTGCACTGGTGCTCTCCCCCGCCGCCCTGCCGACGCTCCAGGTGGG
S217P60425RC5.T0 Noemie Pan troglodytes troglodytes STS genomic, sequence tagged site.
BV618747.1:705-723
CCTCTGAGCTTTGGAGGGTGGACTCTGCAC705CTGCTGCACTGGTGCTCTCTGGGAATTT
Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
HG670306.1:352658882-352658900
TCAAGTCCAAGGTCAAACCTCGGGTTGTGC352658882CTGCTGCACTGGTGCTCTCTGAAGATGCCAACCCTACTGCACCCATATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGAGCACCAGTGCAGCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGAGCACCAGTGCAGCAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.202 | 0.194 | search_plus_done; http://172.18.8.135:50400/match?q=GAGAGCACCAGTGCAGCAG&k=0&no_gap=0&offset=0&limit=50
0.314 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCTGCACTGGTGCTCTC&k=0&no_gap=0&offset=0&limit=23
0.319 | 0.005 | cgi_end;

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