GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-17 04:20:00, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Porphyra yezoensis cDNA clone:PM030c12_r, 5' end.
AV433528.1:424-443
GCGCACCTGGGGAGGGGACAAACGGCGCGA424GAGAGTATGTGCAAAGGCGGCATCGGCCATGAAGACCCGCGCCGCGCAGC
Porphyra yezoensis cDNA, clone:PF025c08_r, 5'end.
AU188383.1:457-476
GCTGCGCGGCGCGGGTCTTCATGGCCGATG457CCGCCTTTGCACATACTCTCTCGCGCCGTTTGTCCCCTCCCCAGGTGCGC
Porphyra yezoensis cDNA clone:PM016e06_r, 5' end.
AV432555.1:431-450
GCTGCGCGGCGCGGGTCTTCATGGCCGATG431CCGCCTTTGCACATACTCTCTCGCGCCGTTTGTCCCCTCCCCAGGTGCGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGAGTATGTGCAAAGGCGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGAGTATGTGCAAAGGCGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.301 | 0.291 | search_plus_done; http://172.18.8.135:50800/match?q=GAGAGTATGTGCAAAGGCGG&k=0&no_gap=0&offset=0&limit=50
0.448 | 0.147 | search_minus_done; http://172.18.8.135:50800/match?q=CCGCCTTTGCACATACTCTC&k=0&no_gap=0&offset=0&limit=49
0.450 | 0.002 | cgi_end;

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