GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 18:26:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sequence 93411 from patent US 9029636.
HL002475.1:506-530
TTTCTGAGAGTGGCTGGCCCTCTGAAGGTG506GAGATGGAGCCTCTATTGAAAATGCACGCACTTATTACAGTAATTTGATTGATCA
GLMAW29TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence.
EV270504.1:591-615
TTTCTGAGAGTGGCTGGCCCTCTGAAGGTG591GAGATGGAGCCTCTATTGAAAATGCACGCACTTATTACAGTAATTTGATTGATCA
Glycine max DNA, BAC clone: GMJENa0068F16_R, 3'end, cultivar: ENREI.
LB039730.1:118-142
TTTCTGAGAGTGGCTGGCCCTCTGAAGGTG118GAGATGGAGCCTCTATTGAAAATGCACGCACTTATTACAGTAATTTGATTAATCA
Glycine max isolate WSM04 1,3-beta-glucosidase (Glyma.11G09260) mRNA, complete cds.
ON834796.1:449-473
TTTCTGAGAGTGGCTGGCCCTCTGAAGGTG449GAGATGGAGCCTCTATTGAAAATGCACGCACTTATTACAGTAATTTGATTGATCA
Glycine soja isolate WSM10 1,3-beta-glucosidase (Glyma.11G09260) mRNA, complete cds.
ON834802.1:449-473
TTTCTGAGAGTGGCTGGCCCTCTGAAGGTG449GAGATGGAGCCTCTATTGAAAATGCACGCACTTATTACAGTAATTTGATTGATCA
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:7209469-7209493
TGATCAATCAAATTACTGTAATAAGTGCGT7209469GCATTTTCAATAGAGGCTCCATCTCCACCTTCAGAGGGCCAGCCACTCTCAGAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGATGGAGCCTCTATTGAAAATGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGATGGAGCCTCTATTGAAAATGC | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.464 | 0.456 | search_plus_done; http://172.18.8.135:50400/match?q=GAGATGGAGCCTCTATTGAAAATGC&k=0&no_gap=0&offset=0&limit=50
0.547 | 0.082 | search_minus_done; http://172.18.8.135:50400/match?q=GCATTTTCAATAGAGGCTCCATCTC&k=0&no_gap=0&offset=0&limit=45
0.548 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).