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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:11:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Epinephelus fuscoguttatus DNA, LG12, complete sequence.
AP022686.1:19855735-19855753
ACCCTATACTTATCTAGACATTACCCAGGG19855735GAGATGTATGTGACAAGGCACATGTCCGAATCAGTTAGATTGAACTTTA
Quercus robur root EST, clone LG0AAD4YG17RM1.
FP054158.1:3-21
GA3GAGATGTATGTGACAAGGCCTCTATCAATGTACCGGAAATCTCCAAGCA
Carpinus viminea chromosome 5.
CP054671.1:31407797-31407815
GAGAGAGAGAGAGAGGGAGAGAGAGAGAGA31407797GAGATGTATGTGACAAGGCCACTTTCGATGTACAGGAAATCTCCGAGCA
Quercus dentata isolate Qdleaves-2020 chromosome 3.
CP116446.1:38389432-38389450
GCAAAAATCAAAGTTCATTTGAACTCTTGA38389432GAGATGTATGTGACAAGGCCTCTTTCATTATACAGAAAGTCTCCTGATG
Quercus dentata isolate Qdleaves-2020 chromosome 3.
CP116446.1:42367286-42367304
GCAAGGATCAAAGTTTGTTTGAACTCTTGA42367286GAGATGTATGTGACAAGGCCTCTTTCATTATACAGAAAGTCTCCTGATG
Malus domestica genome assembly, chromosome: 17.
OU744558.1:6016127-6016145
GGAAAGCCACTCATAATTCACATACACACA6016127GAGATGTATGTGACAAGGCCTCTTTCCATGTACTGGAAATCTCCAAGCA
Quercus robur genome assembly, chromosome: 3.
OW028767.1:36319056-36319074
GCAAGGATCAAAGTTTGTTTGAACTCTTGA36319056GAGATGTATGTGACAAGGCCTCTTTCATTGTACAGAAAGTCTCCTGATG
TSA: Schima mertensiana mRNA, contig: Sm_rep_c1855.
FX147432.1:1324-1342
ATTCAGGAGATCTCAGGTAGTATGAAAGAG1324GCCTTGTCACATACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCA
Coriaria nepalensis isolate Cnep1 chromosome 18.
CP114478.1:8425823-8425841
TGCTTGGTGACTTTCTGTACATTGATAGAG8425823GCCTTGTCACATACATCTCTCTCTCTCTCTGTTGCTGTTATGGTAAGAT
Coriaria nepalensis isolate Cnep1 chromosome 18.
CP114498.1:8417584-8417602
TGCTTGGTGACTTTCTGTACATTGATAGAG8417584GCCTTGTCACATACATCTCTCTCTCTCTCTGTTGCTGTTATGGTAAGAT
Quercus dentata isolate Qdleaves-2020 chromosome 2.
CP116445.1:57750648-57750666
TGCTTGGAGATTTCCGGTACATTGATAGAG57750648GCCTTGTCACATACATCTCTCTCTCTCTCTCTCAAATCACAATTAAGCT
Fagus sylvatica genome assembly, chromosome: 2.
OU015762.1:39261127-39261145
TGCTTGGAAATTTCCGGTACATTGAAAGAG39261127GCCTTGTCACATACATCTCTAGCTCTCTTTATTTCTTTCTCACAATGAA
Quercus robur genome assembly, chromosome: 2.
OW028766.1:52650583-52650601
TGCTTGGAGATTTCCGGTACATTGATAGAG52650583GCCTTGTCACATACATCTCTCTCTCTCTCTCTCTCTCTCTCTCAAATCA
Viola odorata genome assembly, chromosome: 5.
OY829541.1:23653156-23653174
CTGAAGGCTCTTTCTGGTACCATGAGAGAG23653156GCCTTGTCACATACATCTCTCTTTTTTCCGTTTGCTCTGTTTCTCTTCC
Vaccinium vitis-idaea genome assembly, chromosome: 1.
OY978215.1:14874865-14874883
ATTCAGGGGACCTCAGGTACTGGGATAGAG14874865GCCTTGTCACATACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
Myrica gale genome assembly, chromosome: 1.
OZ005598.1:5420033-5420051
TGCTGGGGAACTTCCGGTACAGAGAAAGAG5420033GCCTTGTCACATACATCTCTTCTCTCTCACACAGTGGAAGCTGGGGGGT
Myrica gale genome assembly, chromosome: 3.
OZ005600.1:5424676-5424694
TGCTGGGGAACTTCCGGTACAAAGAAAGAG5424676GCCTTGTCACATACATCTCTTCTCTCTCTCACACAGTGGAAGCTGTGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGATGTATGTGACAAGGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGATGTATGTGACAAGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.248 | 0.240 | search_plus_done; http://172.18.8.135:50400/match?q=GAGATGTATGTGACAAGGC&k=0&no_gap=0&offset=0&limit=50
0.364 | 0.115 | search_minus_done; http://172.18.8.135:50400/match?q=GCCTTGTCACATACATCTC&k=0&no_gap=0&offset=0&limit=43
0.370 | 0.007 | cgi_end;

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