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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-26 20:31:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 134516 from Patent WO2008034648.
FB915243.1:740-759
AAGGGGATTAAAGAATCACCAAAGTTCTAA740GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
Sequence 148142 from Patent WO2008034648.
FB928869.1:740-759
AAGGGGATTAAAGAATCACCAAAGTTCTAA740GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
Sequence 134516 from Patent EP2090662.
HB785302.1:740-759
AAGGGGATTAAAGAATCACCAAAGTTCTAA740GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
Sequence 148142 from Patent EP2090662.
HB798928.1:740-759
AAGGGGATTAAAGAATCACCAAAGTTCTAA740GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
sc69b09.y1 Gm-c1016 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1016-1650 5', mRNA sequence.
AI939248.1:251-270
AAGGGGATTAAAGAATCACCAAAGTTCTAA251GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
sc71f04.y1 Gm-c1016 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1016-1880 5', mRNA sequence.
AI965425.1:250-269
AAGGGGATTAAAGAATCACCAAAGTTCTAA250GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
sv31b12.y1 Gm-c1057 Glycine soja cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1057-1223 5' similar to TR:Q9SG24 Q9SG24 T26J14.6 PROTEIN, mRNA sequence.
BG041209.1:354-373
AAGGGGATTAAAGAATCACCAAAGTTCTAA354GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
saa56c08.y1 Gm-c1060 Glycine soja cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1060-520 5' similar to TR:Q9SG24 Q9SG24 T26J14.6 PROTEIN, mRNA sequence.
BG046572.1:191-210
AAGGGGATTAAAGAATCACCAAAGTTCTAA191GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
sad39h06.y1 Gm-c1075 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1075-372 5', mRNA sequence.
BG551567.1:132-151
AAGGGGATTAAAGAATCACCAAAGTTCTAA132GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
sad04f01.y1 Gm-c1073 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1073-1777 5', mRNA sequence.
BG650279.1:80-99
AAGGGGATTAAAGAATCACCAAAGTTCTAA80GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
saf93g02.y3 Gm-c1079 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1079-1468 5' similar to TR:Q9SG24 Q9SG24 T26J14.6 PROTEIN, mRNA sequence.
BI784815.1:274-293
AAGGGGATTAAAGAATCACCAAAGTTCTAA274GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
sah36b08.y1 Gm-c1036 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1036-3519 5' similar to TR:Q9SG24 Q9SG24 T26J14.6 PROTEIN, mRNA sequence.
BM086152.1:298-317
AAGGGGATTAAAGAATCACCAAAGTTCTAA298GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
saj72d04.y1 Gm-c1072 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1072-5167 5' similar to TR:Q9SG24 Q9SG24 T26J14.6 PROTEIN, mRNA sequence.
BM178388.1:404-423
AAGGGGATTAAAGAATCACCAAAGTTCTAA404GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
sal64b06.y1 Gm-c1061 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1061-3899 5' similar to TR:Q9SG24 Q9SG24 T26J14.6 PROTEIN, mRNA sequence.
BM527639.1:465-484
AAGGGGATTAAAGAATCACAAAAGTTCTAA465GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
sam62g06.y1 Gm-c1069 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1069-4140 5' similar to TR:Q9SG24 Q9SG24 T26J14.6 PROTEIN, mRNA sequence.
BM892655.1:357-376
AAGGGGATTAAAGAATCACCAAAGTTCTAA357GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
sao99f09.y1 Gm-c1081 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1081-4097 5', mRNA sequence.
BQ453837.1:30-49
AGGGGATTAAAGAATCACCAAAGTTCTAA30GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
sas19c12.y1 Gm-c1080 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1080-4343 5' similar to TR:Q9SG24 Q9SG24 T26J14.6 PROTEIN, mRNA sequence.
BU765759.1:562-581
AAGGGGATTAAAGAATCACCAAAGTTCTAA562GAGCAGAGGAGATTTTTGGGACTGAGGAGCT
sau52e10.y1 Gm-c1071 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1071-4460 5' similar to TR:Q9SG24 Q9SG24 T26J14.6 PROTEIN, mRNA sequence.
CA935359.1:317-336
AAGGGGATTAAAGAATCACCAAAGTTCTAA317GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
NOD_214_H09 Phaseolus vulgaris nodule EST library Phaseolus vulgaris cDNA 5', mRNA sequence.
CV535304.1:676-695
AAGGAGGATTAAGAATCTCCAAAGTTCTAA676GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTNTAAAATCT
Pv042C_M13F_F06.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE705682.1:677-696
AAGGAGGATTAAGAATCTCCAAAGTTCTAA677GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTTTAAATCTT
Pv042C_M13R_F06.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE705684.1:272-291
AAGGAGGATTAAGAATCTCCAAAGTTCTAA272GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTTTAAATCTT
GLLBR42TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence.
FG986191.1:699-718
AAGGGGATTAAAGAATCACCAAAGTTCTAA699GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
CCCC10334.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC10334 5', mRNA sequence.
GR838964.1:687-706
AAAGGGATTAAAGAATCACCAAAGTTCTAA687GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTATTTCAATCTTAT
CCCC12840.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC12840 5', mRNA sequence.
GR842944.1:19-38
GAATCACCAAAGTTCTAA19GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
vsu-ars_021974_LI15contig_4871 VSU-ARS-L15 Phaseolus acutifolius cDNA, mRNA sequence.
HO796941.1:642-661
AAGGAGGATTAAGAATCTTCAAAGTTCTAA642GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTTTAAATCTT
Vigna angularis mRNA, clone: VEPS02J12.
HX939423.1:663-682
AAGGAGGATTAAGAATCACCAAAGTTCTAA663GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTTTAAATCTT
Vigna angularis mRNA, clone: VES04A18.
HX943607.1:665-684
AAGGAGGATTAAGAATCACCAAAGTTCTAA665GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTTTAAATCTT
Vigna angularis mRNA, clone: VES10B06.
HX945886.1:664-683
AAGGAGGATTAAGAATCACCAAAGTTCTAA664GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTTTAAATCTT
Vigna angularis mRNA, clone: VES15I10.
HX947942.1:536-555
AAGGAGGATTAAGAATCACCAAAGTTCTAA536GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTTTAAATCTT
Vigna angularis mRNA, clone: VES16J24.
HX948356.1:667-686
AAGGAGGATTAAGAATCACCAAAGTTCTAA667GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTTTAAATCTT
Vigna angularis mRNA, clone: VES18P10.
HX949237.1:671-690
AAGGAGGATTAAGAATCACCAAAGTTCTAA671GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTTTAAATCTT
Vigna angularis mRNA, clone: VES19H07.
HX949418.1:699-718
AAGGAGGATTAAGAATCACCAAAGTTCTAA699GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTTTAAATCTT
TSA: Cajanus cajan cultivar Asha contig05815.Asha mRNA sequence.
EZ653679.1:716-735
AGGAAGATTTAAGAATCACCAAAGTTCTAA716GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTTCAATCTT
Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
AP015044.1:36200260-36200279
AAGGAGGATTAAGAATCACCAAAGTTCTAA36200260GAGCAGAGGAGATTTTTGGGACTAAGGAGCTAATCTTAATTTTAAATCTT
Glycine max cultivar Williams 82 chromosome 9.
CP126434.1:42446931-42446950
AAGGGGATTAAAGAATCACCAAAGTTCTAA42446931GAGCAGAGGAGATTTTTGGGACTGAGGAGCTAATCTTAATTTCAATCTTA
Vitis x doaniana cultivar PI 588149 chromosome 13.
CP128340.1:24219124-24219143
GATGCTTTTGGACGCCGGTGAGGAGTTTTT24219124GAGCAGAGGAGATTTTTGGGAGGAGCTTCAGGCAGAGAGGTGAGTTTTTG
Thermospira aquatica strain F1F22 chromosome, complete genome.
CP073355.1:1199403-1199422
AGTATTGCTGAACGTAGTTGATAGCCTCCT1199403GAGCAGAGGAGATTTTTGGGGGCTTTTTTACCTCCTCTCGCATGAGGCGT
Sequence 4151 from Patent EP2148885.
HI533179.1:283-302
TAAGATTGAAATTAAGATTAGCTCCTCAGT283CCCAAAAATCTCCTCTGCTCTTAGAACTTTTGTGATTCTTTAATCCCCTT
Sequence 4151 from patent US 9271455.
HL706514.1:283-302
TAAGATTGAAATTAAGATTAGCTCCTCAGT283CCCAAAAATCTCCTCTGCTCTTAGAACTTTTGTGATTCTTTAATCCCCTT
GM210009A10E2 Gm-r1021 Glycine max cDNA clone Gm-r1021-3267 3', mRNA sequence.
AW350686.1:382-401
TAAGATTGAAATTAAGATTAGCTCCTCAGT382CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGTGATTCTTTAATCCCCTT
GM880013B10E12 Gm-r1088 Glycine max cDNA clone Gm-r1088-4847 3', mRNA sequence.
BU547299.1:393-412
TAAGATTGAAATTAAGATTAGCTCCTCAGT393CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGTGATTCTTTAATCCCCTT
GM880021B20F10 Gm-r1088 Glycine max cDNA clone Gm-r1088-7964 3', mRNA sequence.
BU550672.1:396-415
TAAGATTGAAATTAAGATTAGCTCCTCAGT396CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGTGATTCTTTAATCCCCTT
GM89019A1G01.r1 Gm-r1089 Glycine max cDNA clone Gm-r1089-7201 3, mRNA sequence.
CO983535.1:161-180
TAAGATTGAAATTAAGATTAGCTCCTCAAT161CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGTGATTCTTTAATCCCCTT
Pv008A_M13F_F08.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE680899.1:457-476
AAGATTTAAAATTAAGATTAGCTCCTTAGT457CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGAGATTCTTAATCCTCCTT
Pv008A_M13R_F08.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE680900.1:457-476
AAGATTTAAAATTAAGATTAGCTCCTTAGT457CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGAGATTCTTAATCCTCCTT
GLQAU14TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence.
FK014034.1:360-379
TAAGATTGAAATTAAGATTAGCTCCTCAGT360CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGTGATTCTTTAATCCCCTT
CCCC10334.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC10334 3', mRNA sequence.
GR838965.1:432-451
TAAGATTGAAATTAAGATTAGCTCCTCAGT432CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGTGATTCTTTAATCCCCTT
CCCC12840.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC12840 3', mRNA sequence.
GR842945.1:432-451
TAAGATTGAAATTAAGATTAGCTCCTCAGT432CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGTGATTC
vsu-ars_005434_LI10Contig_8551 VSU-ARS-L10 Phaseolus acutifolius cDNA, mRNA sequence.
HO780401.1:186-205
AAGATTTAAAATTAAGATTAGCTCCTTAGT186CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGAGATTCTTAATCCTCCTT
Vigna angularis mRNA, clone: VES06K16.
HX944595.1:455-474
AAGATTTAAAATTAAGATTAGCTCCTTAGT455CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGTGATTCTTAATCCTCCTT
TSA: Cajanus cajan cultivar UPAS 120 contig04617.UPAS mRNA sequence.
EZ622334.1:460-479
AAGATTGAAAATTAAGATTAGCTCCTCAGT460CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGTGATTCTTAAATCTTCCT
17949 Glycine max young leaves DNA Glycine max STS genomic, sequence tagged site.
GF093349.1:304-323
TAAGATTGAAATTAAGATTAGCTCCTCAGT304CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGTGATTCTTTAATCCCCTT
Solanum lycopersicum Micro-Tom DNA, chromosome 2, draft genome sequence.
AP028936.1:69227797-69227816
CGTTAGTCAAAGTTTGTCAGGCGCCTCTCT69227797CCCAAAAATCTCCTCTGCTCGCCTCTCTCGCTTTATACACAAAAGTGTAT
Solanum lycopersicum cultivar I-3 chromosome 2.
CP023758.1:52914458-52914477
CGTTAGTCAAAGTTTGTCAGGCGCCTCTCT52914458CCCAAAAATCTCCTCTGCTCGCCTCTCTCGCTTTATACACAAAAGTGTAT
Solanum lycopersicum chromosome ch02, complete genome.
HG975514.1:47491186-47491205
CGTTAGTCAAAGTTTGTCAGGCGCCTCTCT47491186CCCAAAAATCTCCTCTGCTCGCCTCTCTCGCTTTATACACAAAAGTGTAT
Solanum lycopersicum genome assembly, chromosome: 2.
OU640345.1:52218050-52218069
CGTTAGTCAAAGTTTGTCAGGCGCCTCTCT52218050CCCAAAAATCTCCTCTGCTCGCCTCTCTCGCTTTATACACAAAAGTGTAT
Sphenostylis stenocarpa genome assembly, chromosome: 4.
OY731401.1:67254290-67254309
TAAGATTGAAATTAAGATTAGCTTCTCAGT67254290CCCAAAAATCTCCTCTGCTCTTAGAACTTTGGTGATTCTTAATCCTCCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGCAGAGGAGATTTTTGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGCAGAGGAGATTTTTGGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
1.536 | 1.528 | search_plus_done; http://172.18.8.135:50400/match?q=GAGCAGAGGAGATTTTTGGG&k=0&no_gap=0&offset=0&limit=50
2.236 | 0.700 | search_minus_done; http://172.18.8.135:50400/match?q=CCCAAAAATCTCCTCTGCTC&k=0&no_gap=0&offset=0&limit=13
2.248 | 0.013 | cgi_end;

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