GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:57:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

bacterium isolate ede2edc3-c4dd-4cee-bed0-38f5ac94d37a genome assembly, chromosome: 1.
OY821617.1:397225-397244
ATACTGCTCCTCACTGAGGATCAAGTCATT397225GAGCATGGGGACGAGGAGGAGGCCCTGCTGGGAACCCTGGATGGCAAAGC
TSA: Pythium insidiosum mRNA, contig: UN08032.
FX535022.1:171-190
AGCCACGACCATGAGCATGAGCATGAGCAT171GAGCATGGGGACGAGGAGGAGGAGGAGCCGCCGGTCATTACGACGCTCAG
Canna indica chromosome 2.
CP136891.1:59011969-59011988
CAACTAATGGGGGTTAATGCTTGAGGGGAA59011969GAGCATGGGGACGAGGAGGAAGCGCCGACACCTTTAAACGACGGCGTCTT
Canna indica chromosome 2.
CP136891.1:71022410-71022429
CAACTAATGGGTGTTAATGCTTGAGGGGAA71022410GAGCATGGGGACGAGGAGGAAGCGCCGACGCCTTTAAACGACGACGTCTC
Triticum aestivum genome assembly, chromosome: 7B.
LR862527.1:465209818-465209837
CGGCGACGGTCATTCTGCTGGGCTTCGGAC465209818GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
LR865477.1:457403040-457403059
CGGCGACGGTCATTCTGCTGGGCTTCGGAC457403040GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
LR865498.1:451802831-451802850
CGGCGACGGTCATTCTGCTGGGCTTCGGAC451802831GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
LR865519.1:464592696-464592715
CGGCGACGGTCATTCTGCTGGGCTTCGGAC464592696GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
LR865758.1:466682421-466682440
CGGCGACGGTCATTCTGCTGGGCTTCGGAC466682421GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
LR865779.1:684980989-684981008
CGGCGACGGTCATTCTGCTGGGCTTCGGAC684980989GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
LR877328.1:465248303-465248322
CGGCGACGGTCATTCTGCTGGGCTTCGGAC465248303GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
LR878454.1:464081361-464081380
CGGCGACGGTCATTCTGCTGGGCTTTGGAC464081361GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
LS992099.1:462581444-462581463
CGGCGACGGTCATTCTGCTGGGCTTCGGAC462581444GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum turgidum subsp. durum genome assembly, chromosome: 7B.
LT934124.1:446323442-446323461
CGGCGACGGTCATTCTGCTGGGCTTCGGAC446323442GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
OU015740.1:460003064-460003083
CGGCGACGGTCATTCTGCTGGGCTTCGGAC460003064GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
OU343182.1:471675702-471675721
CGGCGACGGTCATTCTGCTGGGCTTCGGAC471675702GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
OU963891.1:461929121-461929140
CGGCGACGGTCATTCTGCTGGGCTTCGGAC461929121GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
OV100756.1:457539337-457539356
CGGCGACGGTCATTCTGCTGGGCTTCGGAC457539337GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
OW530329.1:457539337-457539356
CGGCGACGGTCATTCTGCTGGGCTTCGGAC457539337GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Triticum aestivum genome assembly, chromosome: 7B.
OX637244.1:407810583-407810602
CGGCGACGGTCATTCTGCTGGGCTTCGGAC407810583GAGCATGGGGACGAGGAGGAGCTCGGGGCTCGGGCGAGGAGTGGATCGAG
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737467.1:201103945-201103964
TGGAGAATCCATGTCGGCAGACACCTCCAG201103945GAGCATGGGGACGAGGAGGAGAGAACTATGGAGGGTTCACGCACGCCATG
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737467.1:300824290-300824309
GATGATGAGGAGACGGTGGAGAGCGAGGAG300824290GAGCATGGGGACGAGGAGGAATCTTCTTCGTCTGATGAAGTCCAGGTCGA
Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737474.1:313568940-313568959
GATGATGAGGAGACGGTGGAGAGCGAGGAG313568940GAGCATGGGGACGAGGAGGAATCTTCTTCGTCTGATGAAGTCCAGGTCGA
Hordeum bulbosum genome assembly, chromosome: 1H_4.
OY737481.1:211328093-211328112
TGGAGAATCCATGTCGGCAGACACCTCCAG211328093GAGCATGGGGACGAGGAGGAGAGAACTATGGAGGGTTCACGCACGCCATG
Hordeum bulbosum genome assembly, chromosome: 1H_4.
OY737481.1:311048438-311048457
GATGATGAGGAGACGGTGGAGAGCGAGGAG311048438GAGCATGGGGACGAGGAGGAATCTTCTTCGTCTGATGAAGTCCAGGTCGA
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737489.1:305644794-305644813
GATGATGAGGAGACGGTGGAGAGCGAGGAG305644794GAGCATGGGGACGAGGAGGAATCTTCTTCGTCTGATGAAGTCCAGGTCGA
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737496.1:220379776-220379795
TGGAGAATCCATGTCGGCAGACACCTCCAG220379776GAGCATGGGGACGAGGAGGAGAGAACTATGGAGGGTTCACGCACGCCATG
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737496.1:317733120-317733139
GATGATGAGGAGACGGTGGAGAGCGAGGAG317733120GAGCATGGGGACGAGGAGGAATCTTCTTCGTCTGATGAAGTCCAGGTCGA
Hordeum bulbosum genome assembly, chromosome: 5H_1.
OY737522.1:50316566-50316585
TGGCGTGATTCCAATGGCAGACACCTCCAG50316566GAGCATGGGGACGAGGAGGAGAGGGTTCTAGAGGGCATACGTGGGCTAGG
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737525.1:301946211-301946230
GATGATGAGGAGACGGTGGAGAGCGAGGAG301946211GAGCATGGGGACGAGGAGGAATCTTCTTCGTCTGATGAAGTCCAGGTCGA
Hordeum bulbosum genome assembly, chromosome: 5H_2.
OY737529.1:68963854-68963873
TGGCGTGATTCCAATGGCAGACACCTCCAG68963854GAGCATGGGGACGAGGAGGAGAGGGTTCTAGAGGGCATACGTGGGCTAGG
Hordeum bulbosum genome assembly, chromosome: 1H_4.
OY737539.1:301755758-301755777
GATGATGAGGAGACGGTGGAGAGCGAGGAG301755758GAGCATGGGGACGAGGAGGAATCTTCTTCGTCTGATGAAGTCCAGGTCGA
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737640.1:319698102-319698121
GATGATGAGGAGACGGTGGAGAGCGAGGAG319698102GAGCATGGGGACGAGGAGGAATCTTCTTCGTCTGATGAAGTCCAGGTCGA
Hordeum bulbosum genome assembly, chromosome: 5H_2.
OY737651.1:60535804-60535823
TGGCGGGATTCCAATGGCAGACACCTCCAG60535804GAGCATGGGGACGAGGAGGAGAGGGTTCTAGAGGGCATATGTGGGCTAGG
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737866.1:206699014-206699033
TGGAGAATCCATGTCGGCAGACACCTCCAG206699014GAGCATGGGGACGAGGAGGAGAGAACTATGGAGGGTTCACGCACGCCATG
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737866.1:299253618-299253637
GATGATGAGGAGACGGTGGAGAGCGAGTAG299253618GAGCATGGGGACGAGGAGGAATCTTCTTCGTCTAATGAAGTCCAGGTCGA
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737873.1:212322827-212322846
TGGAGAATCCATGTCGGCAGACACCTCCAG212322827GAGCATGGGGACGAGGAGGAGAGAACTATGGAGGGTTCACGCACGCCATG
Methanoculleus chikugoensis MG62 DNA, complete genome.
AP019781.1:1327716-1327735
CGGGACGACCCCGGCCGACCCCATGCCGCC1327716GAGCATGGGGACGAGGAGGATCATCGGCACGGTGCTCAGGTCCTGGAGGA
Pyrrhosoma nymphula genome assembly, chromosome: 1.
OY754327.1:104688662-104688681
GGGCGGGATGGATACGGAAGTGAAGCAAGA104688662GAGCATGGGGACGAGGAGGAGGAGGTTTTTTAGGCCAAGAGGCACGAAAT
Lutra lutra genome assembly, chromosome: 18.
LR738420.1:32246103-32246122
AGAGAGCCTTCTCCTCCTCCTCCCTCCCCA32246103TCCTCCTCGTCCCCATGCTCCTCAGGGGACCCCCGTGTGGTCCAACATGC
Orcinus orca genome assembly, chromosome: 14.
OW443374.1:89265289-89265308
AGCATGTTCCCAGACAAAGCGAGCCCCGCC89265289TCCTCCTCGTCCCCATGCTCCCCGCAGCTGGACCAGCAGTCTCGGCAGCT
CGN-52346 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w4b24 5', mRNA sequence.
DV705321.1:177-196
TCCTACGGTATCCCCTCCTCCTCCTTCTCC177TCCTCCTCGTCCCCATGCTCCCAGCATGGCTCCTACGGCATCCCCTCCTC
CA00-XX-LP1-004-C04-EB.F Coffea arabica LP1 Coffea arabica cDNA clone CA00-XX-LP1-004-C04-EB, mRNA sequence.
GT673486.1:389-408
TCCTACGGTATCCCCTCCTCCTCCTTCTCC389TCCTCCTCGTCCCCATGCTCCCAGCATGGCTCCTACGGCATCCCCTCCTC
Canna indica chromosome 3.
CP136892.1:60456233-60456252
AAGACATCGTCGTTTAACGGCATCGGCGCT60456233TCCTCCTCGTCCCCATGCTCTTCCCCTCAAGCATTAACCCCCATTAGTTG
Canna indica chromosome 4.
CP136893.1:20672468-20672487
GGAGATACGTCGTTTAAAGGCGTTGGCGCT20672468TCCTCCTCGTCCCCATGCTCTTCCCCTCAAGCATTAACCCCCATTAGTTG
Canna indica chromosome 8.
CP136897.1:54841876-54841895
GAGACACCGTCGTTTAAAGGTGTCGACGCT54841876TCCTCCTCGTCCCCATGCTCTTCCCCTCAAGCATTAACCCCCTTTAGTTG
Triticum aestivum genome assembly, chromosome: 7B.
LR862569.1:288844808-288844827
CTCGATCCACTCCTCGCCCGAGCCCCGAGC288844808TCCTCCTCGTCCCCATGCTCGTCCGAAGCCCAGCAGAATGACCGTCGCCG
Aegilops speltoides subsp. speltoides genome assembly, chromosome: 2B.
OX082598.1:380644191-380644210
CACGATCCACTCCTCGCTCGAGCCCCGAGC380644191TCCTCCTCGTCCCCATGCTCGCCCGGAGCCCAGCAGGACGGCCGCCGCCG
Chenopodium album genome assembly, chromosome: 20.
OX419227.1:16720437-16720456
CCACCTGTCGGCTACACATTAGTTTCACCA16720437TCCTCCTCGTCCCCATGCTCATCCCCAGACGAGTCCGATGAGGAGTCGGA
Melolontha melolontha genome assembly, chromosome: 1.
OW285235.1:152104579-152104598
ATAATAGCAGGGGATCTTTCATAATCCACC152104579TCCTCCTCGTCCCCATGCTCTTCTTTCTTAATATGTGTTATTTCAATTAA
Elysia crispata genome assembly, chromosome: 10.
OY973775.1:12076171-12076190
CTCCTCGTCCCCGTAATCCAGGTTAATGAT12076171TCCTCCTCGTCCCCATGCTCCAGGCTCAGGTCTCTCCTCGTCCCCGTGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGCATGGGGACGAGGAGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGCATGGGGACGAGGAGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.125 | 0.116 | search_plus_done; http://172.18.8.135:50400/match?q=GAGCATGGGGACGAGGAGGA&k=0&no_gap=0&offset=0&limit=50
0.305 | 0.180 | search_minus_done; http://172.18.8.135:50400/match?q=TCCTCCTCGTCCCCATGCTC&k=0&no_gap=0&offset=0&limit=11
0.313 | 0.008 | cgi_end;

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