GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 15:11:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES02O24, 5' end sequence.
FY383198.1:403-422
TGACACCGATGACAAGCCAGCAAAGAAGCA403GAGCCAAACAGCTCCAACTCCCAAGGCAGCATCCACAGATCCCCTGAAAG
Dianthus caryophyllus mRNA, clone: CES09B04, 5' end sequence.
FY385531.1:403-422
TGACACCGATGACAAGCCAGCAAAGAAGCA403GAGCCAAACAGCTCCAACTCCCAAGGCAGCATCCACAGATCCCCTGAAAG
Dianthus caryophyllus mRNA, clone: CFES19_E23, 5' end sequence.
FY401083.1:425-444
TGACACCGATGACAAGCCAGCAAAGAAGCA425GAGCCAAACAGCTCCAACTCCCAAGGCAGCATCCACAGATCCCCTGAAAG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.23.C1.
FX296515.1:515-534
TGACACCGATGACAAGCCAGCAAAGAAGCA515GAGCCAAACAGCTCCAACTCCCAAGGCAGCATCCACAGATCCCCTGAAAG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.23.C2.
FX296516.1:112-131
CTTTCAGGGGATCTGTGGATGCTGCCTTGG112GAGTTGGAGCTGTTTGGCTCTGCTTCTTTGCTGGCTTGTCATCGGTGTCA
Volucella inanis genome assembly, chromosome: 2.
OU026155.1:19167584-19167603
ATTCTATGAGGTATTTGCCATGTCAACAAA19167584GAGTTGGAGCTGTTTGGCTCGCGTTGATTACCATTCTTCGCTAAGAGTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGCCAAACAGCTCCAACTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGCCAAACAGCTCCAACTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.352 | 0.343 | search_plus_done; http://172.18.8.135:50400/match?q=GAGCCAAACAGCTCCAACTC&k=0&no_gap=0&offset=0&limit=50
0.399 | 0.047 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTTGGAGCTGTTTGGCTC&k=0&no_gap=0&offset=0&limit=46
0.401 | 0.002 | cgi_end;

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