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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-12 13:10:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sequence 2129 from Patent WO2009037329.
GN119233.1:150-169
TCCAACATGTCAAATGAAATTGACTAAACC150GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Sequence 2371 from Patent WO2009037329.
GN119475.1:54-73
TCCAACATGTCAAATGAAATTGACTAAACC54GAGCCCCATTGCATCTTCAAAGTTATGGAACTCGGTTGTGTTGAAACAGA
Sequence 12984 from Patent WO2009037329.
GN130088.1:150-169
TCCAACATGTCAAATGAAATTGACTAAACC150GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Sequence 13228 from Patent WO2009037329.
GN130332.1:54-73
TCCAACATGTCAAATGAAATTGACTAAACC54GAGCCCCATTGCATCTTCAAAGTTATGGAACTCGGTTGTGTTGAAACAGA
Sequence 21167 from Patent EP2194140.
HC911014.1:150-169
TCCAACATGTCAAATGAAATTGACTAAACC150GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Sequence 2129 from patent US 8809059.
HK081183.1:150-169
TCCAACATGTCAAATGAAATTGACTAAACC150GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Sequence 2371 from patent US 8809059.
HK081304.1:54-73
TCCAACATGTCAAATGAAATTGACTAAACC54GAGCCCCATTGCATCTTCAAAGTTATGGAACTCGGTTGTGTTGAAACAGA
Sequence 12984 from patent US 8809059.
HK086537.1:150-169
TCCAACATGTCAAATGAAATTGACTAAACC150GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Sequence 13228 from patent US 8809059.
HK086659.1:54-73
TCCAACATGTCAAATGAAATTGACTAAACC54GAGCCCCATTGCATCTTCAAAGTTATGGAACTCGGTTGTGTTGAAACAGA
Sequence 21167 from patent US 8952217.
HK431164.1:150-169
TCCAACATGTCAAATGAAATTGACTAAACC150GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Sequence 60362 from patent US 8952217.
HK450520.1:150-169
TCCAACATGTCAAATGAAATTGACTAAACC150GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a010G05_T7.
AM390042.1:55-74
CTNNNCATGTCAAATGAAATTGACTAAACC55GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
BN25.058D12F011029 BN25 Brassica napus cDNA clone BN25058D12, mRNA sequence.
CD824619.1:128-147
TCCAACATGTCAAATGAAATTGACTAAACC128GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica oleracea var. viridis mRNA, clone: KALE-008C10, 5' end sequence.
DK458672.1:124-143
TCCAACATGTCAAATGAAATTGACTAAACC124GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica oleracea var. viridis mRNA, clone: KALE-018K22, 5' end sequence.
DK462693.1:126-145
TCCAACATGTCAAATGAAATTGACTAAACC126GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica oleracea var. viridis mRNA, clone: KALE-023G14, 5' end sequence.
DK464498.1:126-145
TCCAACATGTCAAATGAAATTGACTAAACC126GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica oleracea var. viridis mRNA, clone: KALE-035B03, 5' end sequence.
DK468953.1:126-145
TCCAACATGTCAAATGAAATTGACTAAACC126GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica oleracea var. viridis mRNA, clone: KALE-053K17, 5' end sequence.
DK476057.1:195-214
TCCAACATGTCAAATGAAATTGACTAAACC195GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica oleracea var. viridis mRNA, clone: KALE-084K13, 5' end sequence.
DK487919.1:191-210
TCCAACATGTCAAATGAAATTGACTAAACC191GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica oleracea var. viridis mRNA, clone: KALE-104A24, 5' end sequence.
DK495350.1:123-142
TCCAACATGTCAAATGAAATTGACTAAACC123GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica oleracea var. viridis mRNA, clone: KALE-128G20, 5' end sequence.
DK504662.1:124-143
TCCAACATGTCAAATGAAATTGACTAAACC124GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica oleracea var. viridis mRNA, clone: KALE-128K16, 5' end sequence.
DK504754.1:124-143
TCCAACATGTCAAATGAAATTGACTAAACC124GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
OL436R Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL436, mRNA sequence.
EH420276.1:76-95
TCCAACATGTCAAATGAAATTGACTAAACC76GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0178395 Brassica napus Leaf library Brassica napus cDNA, mRNA sequence.
EV098898.1:244-263
TCCAACATGTCAAATGAAATTGACTAAACC244GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0184113 Brassica napus Leaf library Brassica napus cDNA, mRNA sequence.
EV103565.1:233-252
TCCAACATGTCAAATGAAATTGACTAAACC233GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0184457 Brassica napus Leaf library Brassica napus cDNA, mRNA sequence.
EV103736.1:233-252
TCCAACATGTCAAATGAAATTGACTAAACC233GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0088035 Brassica napus Cold acclimation - dark Brassica napus cDNA, mRNA sequence.
EV190554.1:148-167
TCCAACATGTCAAATGAAATTGACTAAACC148GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0090412 Brassica napus Cold acclimation - dark Brassica napus cDNA, mRNA sequence.
EV192929.1:277-296
TCCAACATGTCAAATGAAATTGACTAAACC277GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0098208 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV197055.1:233-252
TCCAACATGTCAAATGAAATTGACTAAACC233GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0099734 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV198581.1:171-190
TCCAACATGTCAAATGAAATTGACTAAACC171GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0100880 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV199727.1:112-131
TCCAACATGTCAAATGAAATTGACTAAACC112GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0100978 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV199825.1:160-179
TCCAACATGTCAAATGAAATTGACTAAACC160GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0101738 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV200585.1:136-155
TCCAACATGTCAAATGAAATTGACTAAACC136GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0103339 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV202186.1:140-159
TCCAACATGTCAAATGAAATTGACTAAACC140GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
0103511 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV202358.1:80-99
TCCAACATGTCAAATGAAATTGACTAAACC80GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
RS3BA69TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
EW735534.1:149-168
TCCAACATGTCAAATGAAATTGACTAAACC149GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTGTGTTGAAACAGA
BR005168 light-chilled whole plant cDNA library KBCD Brassica rapa subsp. pekinensis cDNA clone KBCD-043A04 5', mRNA sequence.
EX020524.1:167-186
TCCAACATGTCAAATGAAATTGACTAAACC167GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
BR027763 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-113G06 5', mRNA sequence.
EX043119.1:2-21
C2GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
BR083154 infected leaf cDNA library KFPC Brassica rapa subsp. pekinensis cDNA clone KFPC-036F05 5', mRNA sequence.
EX096864.1:204-223
TCCAACATGTCAAATGAAATTGACTAAACC204GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
BR091604 seed and seedling cDNA library KFSD Brassica rapa subsp. pekinensis cDNA clone KFSD-047C07 5', mRNA sequence.
EX105314.1:218-237
TCCAACATGTCAAATGAAATTGACTAAACC218GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
BR093140 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-007B01 5', mRNA sequence.
EX106850.1:198-217
TCCAACATGTCAAATGAAATTGACTAAACC198GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
BR093184 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-007F02 5', mRNA sequence.
EX106894.1:204-223
TCCAACATGTCAAATGAAATTGACTAAACC204GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
RS2E855TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EY940586.1:128-147
TCCAACATGTCAAATGAAATTGACTAAACC128GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTGTGTTGAAACAGA
RS2F020TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD569222.1:149-168
TCCAACATGTCAAATGAAATTGACTAAACC149GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTGTGTTGAAACAGA
RR2GI14TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD971753.1:106-125
TCCAACATGTCAAATGAAATTGACTAAACC106GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTGTCTTGAAACAGA
RR2GQ65TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD972496.1:130-149
TCCAACATGTCAAATGAAATTGACTAAACC130GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTGTCTTGAAACAGA
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF02A06, 5'-end sequence.
FY064075.1:126-145
TCCAACATGTCAAATGAAATTGACTAAACC126GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
BNAOV1GH_T3_076_B10_17SEPT2007_078 BNAOV1GH Brassica napus cDNA 5', mRNA sequence.
GR448328.1:107-126
TCCAACATGTCAAATGAAATTGACTAAACC107GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
f04_03ju_1p.s 03ju Brassica juncea cDNA clone f04_03ju_1p 5, mRNA sequence.
GT071696.1:71-90
TCCAACATGTCAAATGAAATTGACTAAACC71GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGTTTATGTTGAAACACA
a06_08ju_6m.s 08ju Brassica juncea cDNA clone a06_08ju_6m 5, mRNA sequence.
GT077688.1:69-88
TCCAACATGTCAAATGAAATTGACTAAACC69GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
TSA: Raphanus sativus var. sativus RNA, contig: WG3_226.
FX658659.1:164-183
TCCAACATGTCAAATGAAATTGACTAAACC164GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTGTGTTGAAACAGA
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_98.
FX698404.1:134-153
TCCAACATGTCAAATGAAATTGACTAAACC134GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
KBrB021D04R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB021D04, genomic survey sequence.
DX026024.1:68-87
TCCAACATGTCAAATGAAATTGACTAAACC68GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica napus cultivar Xiang5A chromosome 7.
CP123882.1:14577067-14577086
TCCAACATGTCAAATGAAATTGACTAAACC14577067GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:34937103-34937122
TCCAACATGTCAAATGAAATTGACTAAACC34937103GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica napus genome assembly, chromosome: A08.
HG994362.1:11691751-11691770
TCCAACATGTCAAATGAAATTGACTAAACC11691751GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica rapa genome, scaffold: A08.
LR031575.1:10706400-10706419
TCCAACATGTCAAATGAAATTGACTAAACC10706400GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Brassica rapa genome assembly, chromosome: A08.
LS974624.2:16515103-16515122
TCCAACATGTCAAATGAAATTGACTAAACC16515103GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Raphanus sativus genome assembly, chromosome: 8.
OY743205.1:15500437-15500456
TCCAACATGTCAAATGAAATTGACTAAACC15500437GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTGTGTTGAAACAGA
Brassica napus mRNA for plastidic glutamine synthetase isoform (BnGSL2).
Y12458.1:150-169
TCCAACATGTCAAATGAAATTGACTAAACC150GAGCCCCATTGCATCTTCAAAGTTATGGAGCTCGGTTATGTTGAAACAGA
Magelona johnstoni genome assembly, chromosome: 1.
OZ012684.1:48576298-48576317
GAAGGGCTCGAAATTAAGTTCTCTTCCAGG48576298GAGCCCCATTGCATCTTCAAAAGCTACCTAAAGGTGTAGTGTATAGAAAC
Magelona johnstoni genome assembly, chromosome: 7.
OZ012690.1:34640668-34640687
CACTGGACTCGAAATTAAGTTTTTTTCAGG34640668GAGCCCCATTGCATCTTCAAAAACTACCTAAAGGTGTTGTGTAGAGAAAT
Magelona johnstoni genome assembly, chromosome: 17.
OZ012700.1:32885484-32885503
GGGCTCGAAATTAAGTGTTTTTTTTTCAGG32885484GAGCCCCATTGCATCTTCAAAACCCTCTCTAAAGGTGTTGTGTATAGAAA
Magelona johnstoni genome assembly, chromosome: 18.
OZ012701.1:16885397-16885416
CCAGTGCAGGGCTCGAAATAAAGTTCCGGG16885397GAGCCCCATTGCATCTTCAAGAGGTAATGTGTATAGAAACCAACACATCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGCCCCATTGCATCTTCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGCCCCATTGCATCTTCAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
2.521 | 2.512 | search_plus_done; http://172.18.8.135:50400/match?q=GAGCCCCATTGCATCTTCAA&k=0&no_gap=0&offset=0&limit=50
2.684 | 0.163 | search_minus_done; http://172.18.8.135:50400/match?q=TTGAAGATGCAATGGGGCTC&k=0&no_gap=0&offset=0&limit=0
2.684 | 0.000 | cgi_end;

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