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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:03:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pan troglodytes chromosome UNKNOWN clone CH251-442P17, complete sequence.
AC188425.1:56393-56412
GCCATATGTCTCACCCTTAATTCCACACTT56393GAGCCTTTTGGGTGTTGTGTTTCTCATTCTTGTTTCTTTTTCTCTGGTGC
Heterocephalus glaber genome assembly, chromosome: 4.
OZ001069.1:85492330-85492349
AAATCGGAGCCACATGAAAATAGTAACATC85492330GAGCCTTTTGGGTGTTGTGTGGATTTAGAAAAAGGATTAATGTTAGCTCT
Heterocephalus glaber genome assembly, chromosome: 4.
OZ001112.1:85840614-85840633
AAATCGGAGCCACATGAAAATAGTAACATC85840614GAGCCTTTTGGGTGTTGTGTGGATTTAGAAAAAGGATTAATGTTAGCTCT
Taurulus bubalis genome assembly, chromosome: 2.
OU342712.1:15830115-15830134
TGTGGTTTGATGTACTTCCAGACTGATACG15830115GAGCCTTTTGGGTGTTGTGTTATCAAATTGAATAAAAAAAAGAAAAAATG
Cyclopterus lumpus genome assembly, chromosome: 20.
OY735167.1:13297571-13297590
GGGTCGTAACTGTATTTCCAGACTGATCTG13297571GAGCCTTTTGGGTGTTGTGTGCTCAAATTGAATCAATTTTTTTCCCTTCA
CCGA5462.b1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA5462 5', mRNA sequence.
FL697748.1:14-33
GTCGGAGAGAGGA14GAGCCTTTTGGGTGTTGTGTTGTCCCTGTCCTTTTTTCTTTTTTGAAAAA
G591P639734FD12.T0 Clint Pan troglodytes verus STS genomic, sequence tagged site.
BV539140.1:177-196
GCCATATGTCTCACCCTTAATTCCACACTT177GAGCCTTTTGGGTGTTGTGTTTCTCATTCTTGTTTCTTTTTCTCTGGTGC
Euclidia mi genome assembly, chromosome: 15.
OX123195.2:42430094-42430113
CGTTGAAGTCCCCCATGACAACATTAAAGT42430094GAGCCTTTTGGGTGTTGTGTAAGGCCCTGGAAATGTCTTCGTACATTTCT
Pan troglodytes chromosome 22 clone RP43-040C07 map 22q22.11.
AL954213.1:153018-153037
GCACCAGAGAAAAAGAAACAAGAATGAGAA153018ACACAACACCCAAAAGGCTCAAGTGTGGAATTAAGGGTGAGACATATGGC
Pan troglodytes chromosome 22 clone PTB-026G12 map 22q22.11.
AL954214.1:61993-62012
GCACCAGAGAAAAAGAAACAAGAATGAGAA61993ACACAACACCCAAAAGGCTCAAGTGTGGAATTAAGGGTGAGACATATGGC
Pan troglodytes chromosome 22 clone RP43-034B14 map 22q22.11.
AL954215.1:48375-48394
GCACCAGAGAAAAAGAAACAAGAATGAGAA48375ACACAACACCCAAAAGGCTCAAGTGTGGAATTAAGGGTGAGACATATGGC
Heterocephalus glaber genome assembly, chromosome: 9.
OX090917.1:97455339-97455358
AGAGCTAACATTAATCCTTTTTCTAAATCC97455339ACACAACACCCAAAAGGCTCGATGTTACTATTTTCATGTGGCTCCGATTT
Heterocephalus glaber genome assembly, chromosome: 9.
OX090949.1:97574368-97574387
AGAGCTAACATTAATCCTTTTTCTAAATCC97574368ACACAACACCCAAAAGGCTCGATGTTACTATTTTCATGTGGCTCCGATTT
Dianthus caryophyllus mRNA, clone: CES07F17, 5' end sequence.
FY384877.1:266-285
TCAACGAATCAACCACATCTACATCGACCC266ACACAACACCCAAAAGGCTCAAATGAAGCTCCACTACGCCGACCTCACCG
Dianthus caryophyllus mRNA, clone: CFES01B19, 5' end sequence.
FY394207.1:265-284
TCAACGAATCAACCACATCTACATCGACCC265ACACAACACCCAAAAGGCTCAAATGAAGCTCCACTACGCCGACCTCACCG
Dianthus caryophyllus mRNA, clone: CFES06M11, 5' end sequence.
FY396358.1:262-281
TCAACGAATCAACCACATCTACATCGACCC262ACACAACACCCAAAAGGCTCAAATGAAGCTCCACTACGCCGACCTCACCG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.589.C1.
FX297720.1:265-284
TCAACGAATCAACCACATCTACATCGACCC265ACACAACACCCAAAAGGCTCAAATGAAGCTCCACTACGCCGACCTCACCG
S215P60148FD2.T0 Clara Pan troglodytes troglodytes STS genomic, sequence tagged site.
BV550326.1:117-136
GCACCAGAGAAAAAGAAACAAGAATGAGAA117ACACAACACCCAAAAGGCTCAAGTGTGGAATTAAGGGTGAGACATATGGC
Epichloe gansuensis strain e7080 chromosome 1.
CP098281.1:3169078-3169097
AGAGTTGAAGATGGAACTGGAGACGTGCCT3169078ACACAACACCCAAAAGGCTCTGGGCGAGGTCCAGGCCCGTAAGCTTGGGG
Euclidia mi genome assembly, chromosome: 6.
OX123186.2:1566394-1566413
AGAAATTTACGAAGACATTTCCAGGGCCTT1566394ACACAACACCCAAAAGGCTCACTTTAATGTTGTCATGGGGGACTTCAACG
Euclidia mi genome assembly, chromosome: 21.
OX123202.2:46797732-46797751
ATATACCCTCAAGGTTATCCAAGTGGCCTT46797732ACACAACACCCAAAAGGCTCACTTCAATGTTGTCATGGGGGACTTCAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGCCTTTTGGGTGTTGTGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGCCTTTTGGGTGTTGTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.252 | 0.243 | search_plus_done; http://172.18.8.135:50400/match?q=GAGCCTTTTGGGTGTTGTGT&k=0&no_gap=0&offset=0&limit=50
0.599 | 0.347 | search_minus_done; http://172.18.8.135:50400/match?q=ACACAACACCCAAAAGGCTC&k=0&no_gap=0&offset=0&limit=42
0.607 | 0.009 | cgi_end;

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