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2025-04-06 02:51:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

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TSA: Paeonia suffruticosa contig05165.Pasudosp mRNA sequence.
JI457673.1:244-263
AGATAATGTACTGCTGTACATAAAATTCAG244GAGCTCCATGAGAGCAGCTTCCTCAGAGGCATTGATTTGTAGAGTTACAT
TSA: Betula platyphylla Unigene28622_ya_RNA mRNA sequence.
JP696409.1:82-101
AGATAAGGTATTACTGTACATAAAATTCAG82GAGCTCCATGAGAGCAGCTTCCTCAGAGGCATTGATCCGAAGGGTTACAT
TSA: Musa acuminata AAA Group Unigene60696_B1 mRNA sequence.
JV344652.1:16-35
GTACATAAAACTTAG16GAGCTCCATGAGAGCAGCTTCCTCTGTTAAAGGGGCAAAGAAAAGGAAAT
TSA: Musa acuminata AAA Group Unigene80709_B1 mRNA sequence.
JV348734.1:483-502
TGACAACTTTCCGCTGTACATAAAACTTAG483GAGCTCCATGAGAGCAGCTTCCTCTG
TSA: Musa acuminata AAA Group Unigene48726_B1 mRNA sequence.
JV367457.1:16-35
GTACATAAAACTTAG16GAGCTCCATGAGAGCAGCTTCCTCTGATTCGTTGATTCTTAAGGTTGCAT
TSA: Musa acuminata AAA Group Unigene53280_NK1 mRNA sequence.
JV381939.1:16-35
GTACATAAAACTTAG16GAGCTCCATGAGAGCAGCTTCCTCTGATTCGTTGATTCTTAAGGTTGCAT
TSA: Musa acuminata AAA Group Unigene79057_NK1 mRNA sequence.
JV392460.1:16-35
GTACATAAAACTTAG16GAGCTCCATGAGAGCAGCTTCCTCTGTTAAAGGGGCAAAGAAAAGGAAAT
TSA: Musa acuminata AAA Group Unigene89955_NK1 mRNA sequence.
JV450874.1:483-502
TGACAACTTTCCGCTGTACATAAAACTTAG483GAGCTCCATGAGAGCAGCTTCCTCTG
TSA: Corylus avellana CAV_034403.ca, mRNA sequence.
KA427628.1:260-279
GGATAAGGTATTACTGTACATAAAATTCAG260GAGCTCCATGAGAGCAGCTTCCTCAGAGGCATTGATCCGAAGGGTTACAT
A BAC library has been constructed from cultivar Cabernet Sauvignon using two different restriction enzymes : HindIII (clone prefix : VCS1H) and EcoRI (clone prefix : VCS1E).
CT498853.1:260-279
GGATAGGGTATTGCTATACATGAAATTCAA260GAGCTCCATGAGAGCAGCTTCCTCTGTATCAATGAGTAAAAATGATAAAC
A BAC library has been constructed from cultivar Cabernet Sauvignon using two different restriction enzymes : HindIII (clone prefix : VCS1H) and EcoRI (clone prefix : VCS1E).
CT503564.1:463-482
GGACAGGGTATTGCTATACATGAAATTCAA463GAGCTCCATGAGAGCAGCTTCCTCAGACGCATTAATTCGTAATGTTACAC
A BAC library has been constructed from cultivar Cabernet Sauvignon using two different restriction enzymes : HindIII (clone prefix : VCS1H) and EcoRI (clone prefix : VCS1E).
CT513970.1:463-482
GGACAGGGTATTGCTATACATGAAATTCAA463GAGCTCCATGAGAGCAGCTTCCTCAGACGCATTAATTCGTAATGTTACAC
Vitis vinifera contig VV78X149951.26, whole genome shotgun sequence.
AM480743.2:1426-1445
GGATAGGGTATTGCTATACATGAAATTCAA1426GAGCTCCATGAGAGCAGCTTCCTCTGACGCGTTAATTCGTAATGTTTCAC
Vitis vinifera, whole genome shotgun sequence, contig VV78X094068.6, clone ENTAV 115.
AM480871.1:87211-87230
GGACAGGGTATTGCTATACATGAAATTCAA87211GAGCTCCATGAGAGCAGCTTCCTCAGACGCATTAATTCGTAATGTTACAC
Vitis vinifera contig VV78X161220.12, whole genome shotgun sequence.
AM484349.2:1987-2006
GAGTACAGGGGATGCTAGCATGAAATTCAA1987GAGCTCCATGAGAGCAGCTTCCTYTGACACGTTAATTCGTAATGTATCAT
Spirodela polyrhiza strain 9509 chromosome 1, partial sequence.
CP019093.1:1649556-1649575
CGACAACTTCCCGCTGTACATGTAGCTCAG1649556GAGCTCCATGAGAGCAGCTTCCTCTGTTGCATAAACAGCAATGAAATTGG
UNVERIFIED_CONTAM: Vitis rotundifolia cultivar Noble chromosome 15.
CP092940.1:14991339-14991358
GGATAGGGTATTGCTATACATGAAATTCAA14991339GAGCTCCATGAGAGCAGCTTCCTCTGTATCAATGAATAAAAATGATAATG
Quercus dentata isolate Qdleaves-2020 chromosome 4.
CP116447.1:63424306-63424325
AGACACAGTATTACTGTACATAAAATTTAG63424306GAGCTCCATGAGAGCAGCTTCCTCTGTGCAACGGGAAAAGAAGCATGATT
Musa acuminata subsp. malaccensis isolate AA chromosome 10.
CP126379.1:35650117-35650136
TGACAACTTTCCGCTGTACATAAAACTTAG35650117GAGCTCCATGAGAGCAGCTTCCTCTGTTAAAGGGGCAAAGAAAAGGAAAT
Musa acuminata subsp. malaccensis isolate AA chromosome 21.
CP126390.1:39355242-39355261
TGACAACTTTCCGCTGTACATAAAACTTAG39355242GAGCTCCATGAGAGCAGCTTCCTCTGTTAAAGGGGCAAAGAAAAGGAAAT
Vitis vinifera cultivar Pinot Noir 40024 chromosome 2.
CP126649.1:14340478-14340497
GAGTACAGGGGATGCTAGCATGAAATTCAA14340478GAGCTCCATGAGAGCAGCTTCCTCTGACACGTTAATTCGTAATGTATCAT
Vitis vinifera cultivar Pinot Noir 40024 chromosome 7.
CP126654.1:10477050-10477069
GAGTACAGGGGATGCTAGCATGAAATTCAA10477050GAGCTCCATGAGAGCAGCTTCCTCTGACACGTTAATTCGTAATGTATCAT
Vitis vinifera cultivar Pinot Noir 40024 chromosome 14.
CP126661.1:24976399-24976418
GGACAGGGTATTGCTATACATGAAATTCAA24976399GAGCTCCATGAGAGCAGCTTCCTCAGACGCATTAATTCGTAATGTTACAC
Vitis vinifera cultivar Pinot Noir 40024 chromosome 15.
CP126662.1:21699761-21699780
GGATAGGGTATTGCTATACATGAAATTCAA21699761GAGCTCCATGAGAGCAGCTTCCTCTGTATCAATGAGTAAAAATGATAAAC
Vitis x doaniana cultivar PI 588149 chromosome 14.
CP128322.1:25214839-25214858
GGACAGGGTATTGCTATACATGAAATTCAA25214839GAGCTCCATGAGAGCAGCTTCCTCAGACGCATTAATTCGTAATGTTACAC
Vitis x doaniana cultivar PI 588149 chromosome 15.
CP128323.1:20602720-20602739
GGATAGGGTATTGCTATACATGAAATTCAA20602720GAGCTCCATGAGAGCAGCTTCCTCTGTATCAATGAGTAAAAATGATAAAT
Vitis x doaniana cultivar PI 588149 chromosome 14.
CP128341.1:24769196-24769215
GGACAGGGTATTGCTATACATGAAATTCAA24769196GAGCTCCATGAGAGCAGCTTCCTCAGACGCATTAATTCGTAATGTTACAC
Vitis vinifera cv. PN40024, annotated scaffold_68.assembly12x.
FN595232.1:1379806-1379825
GGACAGGGTATTGCTATACATGAAATTCAA1379806GAGCTCCATGAGAGCAGCTTCCTCAGACGCATTAATTCGTAATGTTACAC
Vitis vinifera cv. PN40024, annotated scaffold_5.assembly12x.
FN596502.1:7302744-7302763
GAGTACAGGGGATGCTAGCATGAAATTCAA7302744GAGCTCCATGAGAGCAGCTTCCTCTGACACGTTAATTCGTAATGTATCAT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A10.
HG996476.1:32907343-32907362
TGACAACTTTCCGCTGTACATGAAACTTAG32907343GAGCTCCATGAGAGCAGCTTCCTCTGTTAAAGGGGCAAAGAAAAGGAAAT
Spirodela intermedia genome assembly, chromosome: 15.
LR743602.1:1833304-1833323
CGACAGCTTTCCGCTGTACATGTAGCTCAG1833304GAGCTCCATGAGAGCAGCTTCCTCTGTTGCATAAACAGCCAGCCATGAAA
Spirodela intermedia genome assembly, chromosome: 15.
LR746278.1:1781645-1781664
CGACAGCTTTCCGCTGTACATGTAGCTCAG1781645GAGCTCCATGAGAGCAGCTTCCTCTGTTGCATAAACAGCCAGCCATGAAA
Musa schizocarpa genome assembly, chromosome: S10.
LS990924.1:36728241-36728260
TGACAACTTTCCGCTGTACATAAAACTTAG36728241GAGCTCCATGAGAGCAGCTTCCTCTGTTAAAGGGGCAAAGAAAAGGAAAT
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:14169734-14169753
GGATAAGGTATTACTGTACATAAAATTTAG14169734GAGCTCCATGAGAGCAGCTTCCTCTGTACTCGGGGAAACAAAACGACACT
Umbilicus rupestris genome assembly, chromosome: 20.
OY787624.1:9700456-9700475
AGACAAAGTATTGCTGTACATAAAATTCAA9700456GAGCTCCATGAGAGCAGCTTCCTCTGCGCCACAAAAAAAGAAGAAGGTAT
Myopa tessellatipennis genome assembly, chromosome: 1.
OX031314.1:46861117-46861136
CCCGAACCGACTTAGAGTTAAACTATTATT46861117GAGCTCCATGAGAGCAGCTTCTTTTATATAGCTCAAGTCGTCTCTAGATT
Quercus mongolica subsp. crispula mRNA, clone: Qm_001_06D01, 5'end sequence, expressed in inner bark.
DB997465.2:635-654
TGTAACCCTACGCATCAATGCCTCTGAAGG635AAGCTGCTCTCATGGAGCTCTTAA
S1G02684 Fruits and flowers treated with GA3 (VvS1) Vitis vinifera cDNA clone S1G02684, mRNA sequence.
EE076113.1:319-338
ATGTAACTTTACGAATTAACGCCTCTGAGG319AAGCTGCTCTCATGGAGCTCTTGAATTTCATGTATAGCAATACCCTATCC
S6B06351 Fruits 7-9 mm (VvS6) Vitis vinifera cDNA clone S6B06351, mRNA sequence.
EE090399.1:157-176
ATGTAACTTTACGAATTAACGCCTCTGAGG157AAGCTGCTCTCATGGAGCTCTTGAATTTCATGTATAGCAATACCCTATCC
SCB06310 Inflorescence with GA3 (VvS12) Vitis vinifera cDNA clone SCB06310, mRNA sequence.
EE108303.1:266-285
ATGTAACTTTACGAATTAACGCCTCTGAGG266AAGCTGCTCTCATGGAGCTCTTGAATTTCATGTATAGCAATACCCTATCC
sT7aVVM026L18069 VVM Vitis vinifera cDNA clone VVM026L18069 5' similar to emb_CAO49077.1 unnamed protein product [Vitis vinifera]. Expect = 2e-99, mRNA sequence.
FC070091.1:616-635
ATGTAACTTTACGAATTAACGCCTCTGAGG616AAGCTGCTCTCATGGAGCTCTTGAATTTCATGTATAGCA
Quercus robur root EST, clone LG0AAD13YA20RM1, similar to PplGI.3|TC52260 similar to UP|Q9FPW6_ARATH POZ/BTB containing-protein AtPOB1, partial.
FP073718.1:34-53
ATGTAATCCTACGCATCAATGCCTCTGAGG34AAGCTGCTCTCATGGAGCTCCTAAATTTTATGTACAGTAATACTGTGTCT
Alnus glutinosa 5-prime EST AG-N01f_037_P15.
FQ342346.1:681-700
ATGTAACCCTTCCGATCAATGCCTCTGAGG681AAGCTGCTCTCATGGAGCTCCTGAATTTTATGT
LJGAC90TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA sequence.
GO008011.1:712-731
GCATGTCACCCTGAGATTACTGCATCTGAG712AAGCTGCTCTCATGGAGCTC
CTRSC1NG-T3-005_A03_09APR2009_016 CTRSC1NG cell culture from Cocculus trilobus Cocculus trilobus cDNA, mRNA sequence.
JG601205.1:700-719
ATGTAACTCTACGCATCAATGCATCTGAAG700AAGCTGCTCTCATGGAGCTCTTGAATTTTATGTACAGTAATGC
TSA: Curcuma longa Locus_2652_Transcript_2/9_Confidence_0.565_Length_2098_C mRNA sequence.
JW790336.1:695-714
ATGCAACACTAAGAATCAATGAATCAGAGG695AAGCTGCTCTCATGGAGCTCTTGAGTTTTATGTACAGTGGAAAGCTGTCA
TSA: Vitis vinifera Locus_68216_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence.
KA146053.1:4-23
AGG4AAGCTGCTCTCATGGAGCTCTTGAATTTCATGTATAGCAATACCCTGTCC
TSA: Betula platyphylla Unigene48154_All.Beplwood mRNA sequence.
KA207166.1:824-843
ATGTAACCCTTCGGATCAATGCGTCTGAGG824AAGCTGCTCTCATGGAGCTCCTGAATTTTATGTACAGTAATACCTTATCT
TSA: Betula platyphylla Unigene13633_All.Beplwood mRNA sequence.
KA253554.1:240-259
TCTTATACTTCTTTTCTCGTGGTACAGAGG240AAGCTGCTCTCATGGAGCTC
TSA: Betula platyphylla Unigene37041_All.Beplwood mRNA sequence.
KA276962.1:725-744
ATGTAACCCTTCGGATCAATGCCTCTGAGG725AAGCTGCTCTCATGGAGCTCCTGAATTTTATGTACAGTAATACCTTATCT
Vitis vinifera, whole genome shotgun sequence, contig VV78X049524.43, clone ENTAV 115.
AM459477.1:10363-10382
GTTTATCATTTTTACTCATTGATACAGAGG10363AAGCTGCTCTCATGGAGCTCTTGAATTTCATGTATAGCAATACCCTATCC
Carpinus viminea chromosome 1.
CP054667.1:5419417-5419436
TCTTATATTTGTTCTCCCGTGGTACAGAGG5419417AAGCTGCTCTCATGGAGCTCCTGAATTTTATGTACAGTAATACCTTATCC
Carpinus viminea chromosome 1.
CP054667.1:64414262-64414281
TCTTATATTTGTTCTCCCGTGGTACAGAGG64414262AAGCTGCTCTCATGGAGCTCCTGAATTTTATGTACAGTAATACCTTATCC
Musa troglodytarum cultivar karat chromosome 9.
CP097511.1:6414833-6414852
TTTCCTTTTCTTTGCCACTTTAAACAGAGG6414833AAGCTGCTCTCATGGAGCTCCTAAGTTTTATGTACAGCGGAAAGTTGTCA
Musa troglodytarum cultivar karat chromosome 9.
CP097511.1:6768158-6768177
TTTCCTTTTCTTTGCCACTTTAAACAGAGG6768158AAGCTGCTCTCATGGAGCTCCTAAGTTTTATGTACAGCGGAAAGTTGTCA
Corylus americana cultivar Rush chromosome 7.
CP125820.1:5035316-5035335
TCTTATATTTGTTTTCCCGTGGTACAGAGG5035316AAGCTGCTCTCATGGAGCTCCTGAATTTCATGTACAGTAATACCTTATCC
Corylus americana cultivar Winkler chromosome 7.
CP125831.1:4854283-4854302
TCTTATATTTGTTTTCCCGTGGTACAGAGG4854283AAGCTGCTCTCATGGAGCTCCTGAATTTCATGTACAGTAATACCTTATCC
Vitis vinifera cultivar Pinot Noir 40024 chromosome 4.
CP126651.1:6925134-6925153
GTGAAACATTACGAATTAATGCGTCAGAGG6925134AAGCTGCTCTCATGGAGCTCTTGAATTTCATGTAGAGCAATACCCTGTCC
Vitis x doaniana cultivar PI 588149 chromosome 1.
CP128317.1:16860177-16860196
ATGATACATTACGAATTAACGTGTCAGAGG16860177AAGCTGCTCTCATGGAGCTCTTGAATTTCATGCTAGCATCCCCTGTACTC
Vitis x doaniana cultivar PI 588149 chromosome 9.
CP128335.1:15056009-15056028
ATGATACATTACGAATTAATGTGTCAGAGG15056009AAGCTGCTCTCATGGAGCTCTTGAATTTCATGCTAGCATCCCCTGTACTC
Vitis vinifera cv. PN40024, annotated scaffold_8.assembly12x.
FN595231.1:6942844-6942863
GTGAAACATTACGAATTAATGCGTCAGAGG6942844AAGCTGCTCTCATGGAGCTCTTGAATTTCATGTAGAGCAATACCCTGTCC
Vitis vinifera cv. PN40024, annotated scaffold_109.assembly12x.
FN595250.1:977948-977967
ATGATACATTACGAATTAACGTGTCAGAGG977948AAGCTGCTCTCATGGAGCTCTTGAATTTCATGCTAGCATCCCCTGTACTC
Vitis vinifera cv. PN40024, annotated scaffold_46.assembly12x.
FN596755.1:1854007-1854026
GTTTATCATTTTTACTCATTGATACAGAGG1854007AAGCTGCTCTCATGGAGCTCTTGAATTTCATGTATAGCAATACCCTATCC
Vitis vinifera clone SS0ABG33YH04.
FQ383054.1:707-726
ATGTAACTTTACGAATTAACGCCTCTGAGG707AAGCTGCTCTCATGGAGCTCTTGAATTTCATGTATAGCAATACCCTATCC
Corylus avellana genome assembly, chromosome: ca7.
LR899429.1:5339508-5339527
TTATATTTGTTTTCCCGTGGTACACAGAGG5339508AAGCTGCTCTCATGGAGCTCCTGAATTTTATGTACAGTAATACCTTATCC
Musa schizocarpa genome assembly, chromosome: S02.
LS990916.1:34415073-34415092
TCCTTTTTGTTTTTTCACTTTAAACAGAGG34415073AAGCTGCTCTCATGGAGCTCTTAAGTTTTATGTACAGCAGCAACTTGTCA
Musa schizocarpa genome assembly, chromosome: S02.
LS990916.1:34425943-34425962
TCCTTTTTGTTTTTTCACTTTAAACAGAGG34425943AAGCTGCTCTCATGGAGCTCTTAAGTTTTATATACAGAAGAGAGTTGTCA
Quercus robur genome assembly, chromosome: 4.
OW028768.1:34822914-34822933
AATCATGCTTCTTTTCCCGTTGCACAGAGG34822914AAGCTGCTCTCATGGAGCTCCTAAATTTTATGTACAGTAATACTGTGTCT
Scutellaria galericulata genome assembly, chromosome: 15.
OX335798.1:14169024-14169043
ATAGTAACCTCCTTCTGAATGGAACAGAGG14169024AAGCTGCTCTCATGGAGCTCCTGAATTTTATGTATAGTAGTACATTAAAC
Scutellaria minor genome assembly, chromosome: 2.
OX940726.1:30564565-30564584
ATAGTAACCTCCTTCTGAATGGAACAGAGG30564565AAGCTGCTCTCATGGAGCTCCTGAATTTTATGTATAGTAGTACATTAAAC
Alnus glutinosa genome assembly, chromosome: 3.
OY340900.1:7110278-7110297
AATTCATGTACTTTTCCCGTGGTACAGAGG7110278AAGCTGCTCTCATGGAGCTCCTGAATTTTATGTACAGTAATACCTTATCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGCTCCATGAGAGCAGCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGCTCCATGAGAGCAGCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.496 | 0.487 | search_plus_done; http://172.18.8.135:50400/match?q=GAGCTCCATGAGAGCAGCTT&k=0&no_gap=0&offset=0&limit=50
1.472 | 0.976 | search_minus_done; http://172.18.8.135:50400/match?q=AAGCTGCTCTCATGGAGCTC&k=0&no_gap=0&offset=0&limit=14
1.495 | 0.023 | cgi_end;

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