GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 08:02:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CAN021_2006-03-14_1/CAN021_C08_1 Cannabis sativa (marijuana cultivar Skunk #1) glandular trichomes isolated from female inflorescences Cannabis sativa cDNA, mRNA sequence.
GR222021.1:140-159
TAGAAAGTAATAATAATAATCATGGTGGTA140TTTGATAAGGGAGCAAGCTCTTCCACTTCATCTCTACCCAGAGAAGACAC
TSA: Cannabis sativa PK28570.1_1.CasaPuKu mRNA sequence.
JP449652.1:316-335
TAGAAAGTAATAATAATAATCATGGTGGTA316TTTGATAAGGGAGCAAGCTCTTCCACTTCATCTCTACCCAGAGAAGACAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGCTTGCTCCCTTATCAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGCTTGCTCCCTTATCAAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.308 | 0.299 | search_plus_done; http://172.18.8.135:50400/match?q=GAGCTTGCTCCCTTATCAAA&k=0&no_gap=0&offset=0&limit=50
0.468 | 0.160 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGATAAGGGAGCAAGCTC&k=0&no_gap=0&offset=0&limit=50
0.469 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).