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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:13:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium pratense cDNA clone:RCC00310.
BB928978.1:432-451
GTTGAGGTAGTTGTTGAGGAGGGGCGGATT432GAGGAGGAGGTTGAGCGTTAGGGGCCCACATCTGAGGAGGTTGAGTTTGT
Trifolium pratense cDNA clone:RCC03705.
BB931844.1:432-451
GTTGAGGTAGTTGTTGAGGAGGGGCGGATT432GAGGAGGAGGTTGAGCGTTAGGGGCCCACATCTGAGGAGGTTGAGTTTGT
Trifolium pratense cDNA clone:RCC05120.
BB933045.1:446-465
GTTGAGGTAGTTGTTGAGGAGGGGCGGATT446GAGGAGGAGGTTGAGCGTTAGGGGCCCACATCTGAGGAGGTTGAGTTTGT
Trifolium pratense cDNA clone:RCC11272.
BB938066.1:432-451
GTTGAGGTAGTTGTTGAGGAGGGGCGGATT432GAGGAGGAGGTTGAGCGTTAGGGGCCCACATCTGAGGAGGTTGAGTTTGT
Trifolium pratense DNA, clone:RCG22536.
DE229410.1:46-65
GTTGAGGTAGTTGTTGAGGAGGGGCGGATT46GAGGAGGAGGTTGAGCGTTAGGGGCCCACATCTGAGGAGGTTGAGTTTGT
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:1134560-1134579
GTTGAGGTTGTTGTTGAGGAGGGGCCGATT1134560GAGGAGGAGGTTGAGCGTTAGGGGCCCACATCTGAGGAGGTTGGGTCTGG
Ulota crispa genome assembly, chromosome: 7.
OY987248.1:14709387-14709406
CTTTTTAAACGTTGCTGGGAACTATGGTCA14709387GAGGAGGAGGTTGAGCGTTACCGGCTTACGAGCATCTCTAGCCAACCTCT
Trifolium pratense cDNA clone:RCC05991.
BB933498.1:171-190
ACAAACTCAACCTCCTCAGATGTGGGCCCC171TAACGCTCAACCTCCTCCTCAATCCGCCCCTCCTCAACAACTACCTCAAC
Trifolium pratense cDNA clone:RCC06784.
BB934192.1:151-170
ACAAACTCAACCTCCTCAGATGTGGGCCCC151TAACGCTCAACCTCCTCCTCCTCCACCTCCTCCTCCTTCCCCATCACCAC
Trifolium pratense cDNA clone:RCC09516.
BB936561.1:200-219
ACAAACTCAACCTCCTCAGATGTGGGCCCC200TAACGCTCAACCTCCTCCTCAATCCGCCCCTCCTCAACAACTACCTCAAC
Trifolium pratense mRNA for putative DNA binding protein, complete cds.
AB234881.1:191-210
ACAAACTCAACCTCCTCAGATGTGGGCCCC191TAACGCTCAACCTCCTCCTCAATCCGCCCCTCCTCAACAACTACCTCAAC
Trifolium dubium genome assembly, chromosome: 2.
OX638063.1:58689036-58689055
TCAGGCCCAACCTCCTCAGATGTGGGCCCC58689036TAACGCTCAACCTCCTCCTCAATCGGCTCCTCCTCAACAACAACCTCAGC
Trifolium dubium genome assembly, chromosome: 12.
OX638073.1:36087678-36087697
TCAAGCCCAACCTCCTCAGATGTGGGCCCC36087678TAACGCTCAACCTCCTCCTCAACCTGCCTCCGCCGATGAGGTCCGTACTC
Trifolium fragiferum genome assembly, chromosome: 4.
OX940792.1:61926830-61926849
TCAACCCCAACTTCCTCAGATGTGGGCCCC61926830TAACGCTCAACCTCCTCCTCAATCCGCTCCTCCTCAACAACAGCCTCAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGGAGGAGGTTGAGCGTTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGAGGAGGTTGAGCGTTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.355 | 0.346 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGAGGAGGTTGAGCGTTA&k=0&no_gap=0&offset=0&limit=50
0.478 | 0.123 | search_minus_done; http://172.18.8.135:50400/match?q=TAACGCTCAACCTCCTCCTC&k=0&no_gap=0&offset=0&limit=43
0.483 | 0.005 | cgi_end;

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