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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-25 21:00:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Vigna angularis mRNA, clone: VEPS11_P07.
HX942825.1:725-744
GATGCACTGGAGAATGAACTGGAGGGTTAA725GAGGAGGGTGAACTGGAACAAGCGGAGGGTTGAGAGGAGGATGAACAGGG
Vigna angularis mRNA, clone: VES16C05.
HX948173.1:713-732
GATGCACTGGAGAATGAACTGGAGGGTTAA713GAGGAGGGTGAACTGGAACAAGCGGAGGGTTGAGAGGAGGATGAACAGGG
GS_Ba090K07.F GS_Ba Glycine syndetika genomic 5', genomic survey sequence.
HN823830.1:35-54
GGTAAGGGTGCACCGGAACCGGAGGATTGA35GAGGAGGGTGAACTGGAACAGGAGGTTTAACCGGAGGGTGAACTGGAACC
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:12256839-12256858
GATGCACTGGAGAATGAACTGGAGGGTTAA12256839GAGGAGGGTGAACTGGAACAAGCGGAGGGTTGAGAGGAGGATGAACAGGG
Thysanoteuthis rhombus genome assembly, chromosome: 26.
OY735223.1:44048743-44048762
CGGGGAAGACAAAAAAAGATAAAATAAGAG44048743GAGGAGGGTGAACTGGAACATGGGAAGAAGAAAAAGAAGAAGAAAAAGAA
Eunapius fragilis genome assembly, chromosome: 5.
OY811975.1:4661632-4661651
ACAGTAAGGGAGTTGATAGATGCTGTTTGC4661632GAGGAGGGTGAACTGGAACAATGGCTGCCCCAAAGTCCCAAGAAGGGACA
Eunapius fragilis genome assembly, chromosome: 7.
OY811977.1:2450266-2450285
ACAGTAAGGGAGTTGATAGGTGCTGTTTGC2450266GAGGAGGGTGAACTGGAACAATGGCTGCCCCAAAGTCCCAAGAAGGGACA
Eunapius fragilis genome assembly, chromosome: 10.
OY811980.1:5681610-5681629
ACGGTAAGGGAGTTGATAGGTGCTGTTTGC5681610GAGGAGGGTGAACTGGAACAATGGCTGCTCCAAAGTCCCAAGAAGGAACA
Eunapius fragilis genome assembly, chromosome: 12.
OY811982.1:3750254-3750273
ACAGTAAGGGAGTTGATAGGTGCTGTTTGC3750254GAGGAGGGTGAACTGGAACAATGGCTGCCCCAAAGTCCCAAGAAGGGACA
Eunapius fragilis genome assembly, chromosome: 14.
OY811984.1:5871802-5871821
ACAGTAAGGGAGTTGATAGGTGCTGTTTGC5871802GAGGAGGGTGAACTGGAACAATGGCTGTCCCAAAGTCCCAAGAAGGGACA
Vigna angularis mRNA, clone: VEPS02F12.
HX939331.1:318-337
CCCTGTTCATCCTCCTCTCAACCCTCCGCT318TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS02O01.
HX939524.1:340-359
CCCTGTTCATCCTCCTCTCAACCCTCCGCT340TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS03D20.
HX939657.1:322-341
CCCTGTTCATCCTCCTCTCAACCCTCCGCT322TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS03O04.
HX939894.1:340-359
CCCTGTTCATCCTCCTCTCAACCCTCCGCT340TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS04I04.
HX940120.1:321-340
CCCTGTTCATCCTCCTCTCAACCCTCCGCT321TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS05B24.
HX940350.1:125-144
CCCTGTTCATCCTCCTCTCAACCCTCCGCT125TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS06C08.
HX940724.1:75-94
CCCTGTTCATCCTCCTCTCAACCCTCCGCT75TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS06L10.
HX940921.1:336-355
CCCTGTTCATCCTCCTCTCAACCCTCCGCT336TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS07B10.
HX941048.1:268-287
CCCTGTTCATCCTCCTCTCAACCCTCCGCT268TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS07G17.
HX941168.1:280-299
CCCTGTTCATCCTCCTCTCAACCCTCCGCT280TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS07I21.
HX941217.1:435-454
CCCTGTTCATCCTCCTCTCAACCCTCCGCT435TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS08C11.
HX941442.1:3-22
CT3TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS08O02.
HX941708.1:332-351
CCCTGTTCATCCTCCTCTCAACCCTCCGCT332TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS09A20.
HX941772.1:336-355
CCCTGTTCATCCTCCTCTCAACCCTCCGCT336TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS10_B13.
HX942145.1:5-24
CGCT5TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS10_C21.
HX942175.1:334-353
CCCTGTTCATCCTCCTCTCAACCCTCCGCT334TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS10_F20.
HX942242.1:339-358
CCCTGTTCATCCTCCTCTCAACCCTCCGCT339TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS10_G21.
HX942267.1:325-344
CCCTGTTCATCCTCCTCTCAACCCTCCGCT325TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCTTC
Vigna angularis mRNA, clone: VEPS10_O15.
HX942447.1:294-313
CCCTGTTCATCCTCCTCTCAACCCTCCGCT294TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS11_F02.
HX942596.1:340-359
CCCTGTTCATCCTCCTCTCAACCCTCCGCT340TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS11_J08.
HX942690.1:340-359
CCCTGTTCATCCTCCTCTCAACCCTCCGCT340TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS11_K11.
HX942714.1:340-359
CCCTGTTCATCCTCCTCTCAACCCTCCGCT340TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VEPS11_L01.
HX942727.1:325-344
CCCTGTTCATCCTCCTCTCAACCCTCCGCT325TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VES02B07.
HX942871.1:332-351
CCCTGTTCATCCTCCTCTCAACCCTCCGCT332TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VES02N12.
HX943160.1:322-341
CCCTGTTCATCCTCCTCTCAACCCTCCGCT322TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VES07G17.
HX944881.1:574-593
CCCTGTTCATCCTCCTCTCAACCCTCCGCT574TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VES14J05.
HX947581.1:451-470
CCCTGTTCATCCTCCTCTCAACCCTCCGCT451TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VES15C23.
HX947813.1:318-337
CCCTGTTCATCCTCCTCTCAACCCTCCGCT318TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vigna angularis mRNA, clone: VES20N14.
HX949943.1:340-359
CCCTGTTCATCCTCCTCTCAACCCTCCGCT340TGTTCCAGTTCACCCTCCTCTTAACCCTCCAGTTCATTCTCCAGTGCATC
Vicia faba genome assembly, chromosome: 4.
OX451739.1:792498191-792498210
GGAAAATTTCAGGATTTTGAAGATTTTTGA792498191TGTTCCAGTTCACCCTCCTCGTCCCCTTCCGACCATAGAAATTTTTTTGG
Eunapius fragilis genome assembly, chromosome: 6.
OY811976.1:6562296-6562315
TGTCCCTTCTTGGGACTTTGGGGCAGCCAT6562296TGTTCCAGTTCACCCTCCTCGCAAACAGCACCTATCAACTCCCTTACTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGGAGGGTGAACTGGAACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGAGGGTGAACTGGAACA | format : html | download : | debug :

0.009 | 0.009 | search_start;
2.187 | 2.178 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGAGGGTGAACTGGAACA&k=0&no_gap=0&offset=0&limit=50
4.799 | 2.612 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTCCAGTTCACCCTCCTC&k=0&no_gap=0&offset=0&limit=40
4.818 | 0.020 | cgi_end;

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