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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:15:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Nibea albiflora genome assembly, chromosome: 16.
LR699039.1:13001613-13001634
GAGTCTGTGGACGAGAAGAAGGAGGAAGAA13001613GAGGATGAAGAGGAAGAGTATGAAGATAAAAGAGGACGCTCAGAGGATATTT
Sequence 1080 from patent US 8692064.
HJ924935.1:520-541
TATGATGAGTTTGAAGATGATTTTGATGAA520GAGGATGAAGAGGAAGAGTATGGTCATGGTCATGGTCATGGTCATGGTCATG
TSA: Cajanus cajan cultivar UPAS 120 contig23545.UPAS mRNA sequence.
EZ641262.1:46-67
TTTGAAGACGATTTAGATGATTTTGATGAG46GAGGATGAAGAGGAAGAGTATGGATATGGACATGGACATGGACATGGACATG
TSA: Strongylocentrotus purpuratus WHL22.248839.2 mRNA sequence.
JT100369.1:1549-1570
GAAGAGGATGAGGAAGAAGAAGAGGATGAA1549GAGGATGAAGAGGAAGAGTATGAAGATGAGGAAGAAGGAGATGAGGAGGAAG
TSA: Strongylocentrotus purpuratus WHL22.248839.1 mRNA sequence.
JT108702.1:1549-1570
GAAGAGGATGAGGAAGAAGAAGAGGATGAA1549GAGGATGAAGAGGAAGAGTATGAAGATGAGGAAGAAGGAGATGAGGAGGAAG
Glycine max cDNA, clone: GMFL01-51-O16.
AK287378.1:843-864
TATGATGAGTTTGAAGATGATTTTGATGAA843GAGGATGAAGAGGAAGAGTATGGTCATGGTCATGGTCATGGCCATGGGCAGC
Strongylocentrotus purpuratus clone R3-3093P21, WORKING DRAFT SEQUENCE, 12 unordered pieces.
AC178284.1:83464-83485
GAAGAGGATGAGGAAGAAGAAGAGGATGAA83464GAGGATGAAGAGGAAGAGTATGAAGATGAGGAAGAAGGAGATGAGGAGGAAG
Strongylocentrotus purpuratus clone R3-1037J17, WORKING DRAFT SEQUENCE, 29 unordered pieces.
AC181740.1:129077-129098
GAAGAGGATGAGGAAGAAGAAGAGGATGAA129077GAGGATGAAGAGGAAGAGTATGAAGATGAGGAAGAAGGAGATGAGGAGGAAG
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-08.
CP023120.1:4828438-4828459
GATGAGGATGATTTTGATGATTATGATGAT4828438GAGGATGAAGAGGAAGAGTATGGTCATGGCCATGGTCAAGGTGGTCATGGCC
Glycine max cultivar Williams 82 chromosome 20.
CP126445.1:49728708-49728729
TATGATGAGTTTGAAGATGATTTTGATGAA49728708GAGGATGAAGAGGAAGAGTATGGTCATGGTCATGGTCATGGTCATGGTCATG
Alisma plantago-aquatica genome assembly, chromosome: 7.
OY856415.1:495543082-495543103
GTCTCGCTAACCAAGGCATTGTGTTACCCA495543082GAGGATGAAGAGGAAGAGTATGACCCGGCTACAATAAAAGAGGCCACTGCTG
Tricholauxania praeusta genome assembly, chromosome: 1.
OX459028.1:31595679-31595700
GAACACAGCAAATGCTTAGACGATTATAAT31595679GAGGATGAAGAGGAAGAGTATGAGGATTCTAACTGTAGTAATAAAAAAAATA
Gasteruption jaculator genome assembly, chromosome: 10.
OX463770.1:3402726-3402747
TTTTTTAAATGAAAAATAGGTGAAGGTTTG3402726GAGGATGAAGAGGAAGAGTATGATGAAGACGACGTGGATGAGGACGATGATA
Meiosimyza decipiens genome assembly, chromosome: 1.
OY804258.1:26691958-26691979
GAACATAACAAATGTTTAGACGATTATAAT26691958GAGGATGAAGAGGAAGAGTATGAGCATTCTAATGTTGATATCAAATCAAATA
Sphaeramia orbicularis genome assembly, chromosome: 21.
LR597478.1:11170080-11170101
CTTCAGGTGACTCCTCCTCTTCTTCCTCCT11170080CATACTCTTCCTCTTCATCCTCAACCTCTGGCTGAGGTTTGTGAATGAAGTC
Neostethus bicornis genome assembly, chromosome: 6.
LR738544.1:10462601-10462622
CCTCCTCTTCTTCTCCTTCCTCCTCCTCCT10462601CATACTCTTCCTCTTCATCCTCACTAAACTCAGTATCCTCTTTAGTCAGAGG
Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 1.
LR884460.1:5728686-5728707
GTTTTCCTTCATCTTCTTCCTCTTCCTCCT5728686CATACTCTTCCTCTTCATCCTCTCCCTCTTCATCGTCAGCCTCTCCTGATTC
Daucus carota subsp. sativus cultivar DH1 chromosome 6.
CP093348.1:24620903-24620924
CACCAGAGTTAGCCATGAGAGCTAGATTTC24620903CATACTCTTCCTCTTCATCCTCATCAGACTCTTCCCAGCACTTTTCTTCAGC
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 6.
CP125978.1:490909440-490909461
CTCTCTTGTTCTTCTTCATCCTCCTTTCTT490909440CATACTCTTCCTCTTCATCCTCCTCTCCTCGTCCTCTCTTCCTCCTCCTCCT
Agrostemma githago genome assembly, chromosome: 5.
OY288243.1:76636590-76636611
CGTACTCGTCACCGTCCTCTTATTCGCCGC76636590CATACTCTTCCTCTTCATCCTCATTCCCTACGTTCTCTCCCTTGCACGTCAA
Agrostemma githago genome assembly, chromosome: 23.
OY288261.1:50392737-50392758
CGTCCTCGTCACCGTCCTCTTACTCGCCGC50392737CATACTCTTCCTCTTCATCCTCATTCCCTACGTTCTCTCCCTTGCACGCCAA
Galeopsis tetrahit genome assembly, chromosome: 5.
OY776123.1:26166357-26166378
GCTTTGAATAATGATCTCTCTTGGAATACA26166357CATACTCTTCCTCTTCATCCTCATCATCACGGAATCTAACGGCCTTGTAGAT
Galeopsis tetrahit genome assembly, chromosome: 5.
OY776123.1:66418109-66418130
GCTTTGAATACGGATCTCTCTTGGAATACA66418109CATACTCTTCCTCTTCATCCTCATCATCACGGAATCTAACGGCCTTGTAGAT
Galeopsis tetrahit genome assembly, chromosome: 12.
OY776130.1:11514277-11514298
GAATTGGATAGTGATTTCTCTTGGTATACA11514277CATACTCTTCCTCTTCATCCTCATCATCACGGAATCTAACGGCCTTGTAAAT
Geranium rotundifolium genome assembly, chromosome: 10.
OY987320.1:10198527-10198548
CAACTGGTTCCTCATCGTTATCGTCATCCT10198527CATACTCTTCCTCTTCATCCTCCTGTTCCTCCTCTCCCTCTTCATCAGTGGC
Sporosarcina sp. PTS2304 chromosome, complete genome.
CP031230.1:2266796-2266817
CCCCCTATACAGGGAGCGACAACCCATCGC2266796CATACTCTTCCTCTTCATCCTCAAATTTCAATCCACGCCCCCTATACAGGGA
Branchellion lobata genome assembly, chromosome: 14.
OX387259.1:826799-826820
CCTCTTTCTCCTCATTCTCTTCATCTTCCC826799CATACTCTTCCTCTTCATCCTCCTCCTCGTCGCCATCTTCCTTCTCATCCTC
Meiosimyza platycephala genome assembly, chromosome: 1.
OY759208.1:117505055-117505076
TATTTGATTTGATACCAATATTAGAATACT117505055CATACTCTTCCTCTTCATCCTCATTATAATCGTCTAAGCATTTGCTGTGTTC
Aradus depressus genome assembly, chromosome: 1.
OY759214.1:1708176-1708197
CCTCATCATCAGAGACAGCATAATCTTCCG1708176CATACTCTTCCTCTTCATCCTCTTCCGTTGTCTGTTCGAACTCTTCATCATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGGATGAAGAGGAAGAGTATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGATGAAGAGGAAGAGTATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.249 | 0.240 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGATGAAGAGGAAGAGTATG&k=0&no_gap=0&offset=0&limit=50
0.363 | 0.114 | search_minus_done; http://172.18.8.135:50400/match?q=CATACTCTTCCTCTTCATCCTC&k=0&no_gap=0&offset=0&limit=36
0.373 | 0.010 | cgi_end;

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