GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-17 16:15:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC16d21_042, unspecified EST.
FY459634.1:22-41
AACGCAACGCTGCGAAGTGTG22GAGGCAGCAGCTCAGAATTTGTAGTAACCCAACCAATCTTGTTTCTCTTC
Sus scrofa scrofa breed NS chromosome 13.
CP071564.1:155862827-155862846
ACTTGACACATGCTCGTATCATATGACTGA155862827AAATTCTGAGCTGCTGCCTCCCTTTGAGGGCAGCTTCATTTGAATACTAC
Sus scrofa genome assembly, chromosome: 13.
OY997220.1:167286858-167286877
ACTTGACACATGCTCGTATCATATGACTGA167286858AAATTCTGAGCTGCTGCCTCCCTTTGAGGGCAGCTTCATTTGAATACTAC
Streptopelia turtur genome assembly, chromosome: 5.
LR594556.1:64815654-64815673
AGACAAACTTATTTCACTTGTGGCATCCAG64815654AAATTCTGAGCTGCTGCCTCTGGGAATTCTGCAAAGATGAAGAAGTCCCT
602542959F1 NIH_MGC_59 Homo sapiens cDNA clone IMAGE:4673678 5', mRNA sequence.
BG495293.1:751-770
CAGTAACTCTGGGATTAATTCCCATGAACT751AAATTCTGAGCTGCTGCCTCGATATAGTCCGACTTAAGACCTGACGCCAG
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-491M18.
FP325292.2:186972-186991
ACTTGACACATGCTCGTATCATATGACTGA186972AAATTCTGAGCTGCTGCCTCCCTTTGAGGGCAGCTTCATTTGAATACTAC
Trifolium repens isolate ACLI19 chromosome 07_0cc.
CP125848.1:43606069-43606088
GAAGAGAAACAAGGTAGGTTGGGTTACTAC43606069AAATTCTGAGCTGCTGCCTCCGCACTTCGCAGCGTTGCGTTTGCCGATAC
Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:43258199-43258218
GAAGAGAAACAAGATTGGTTGGGTTACTAC43258199AAATTCTGAGCTGCTGCCTCCACACTTCGCAGCGTTGCGTTTGCCGATAC
Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:43263298-43263317
GAAGAGAAACAAGATTGGTTGGGTTACTAC43263298AAATTCTGAGCTGCTGCCTCCACACTTCGCAGCGTTGCGTTTGCCGATAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGGCAGCAGCTCAGAATTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGCAGCAGCTCAGAATTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.203 | 0.194 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGCAGCAGCTCAGAATTT&k=0&no_gap=0&offset=0&limit=50
0.250 | 0.047 | search_minus_done; http://172.18.8.135:50400/match?q=AAATTCTGAGCTGCTGCCTC&k=0&no_gap=0&offset=0&limit=49
0.256 | 0.006 | cgi_end;

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