GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 20:50:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

S.oleracea L. ftr A1 mRNA.
X77162.1:347-370
AATTGAAGAAGAATCTGGAGAAAGTTGGAT347GCAAGGTTAAGGTGAAATCCCCTCTTAAAGTCTACCATGTTCCTAAATTACCTG
S.oleracea L. ftr A2 mRNA.
X77163.1:352-375
AATTGAAGAAGAATCTGGAGAAAGTTGGAT352GCAAGGTTAAGGTGAAATCCCCTCTTAAAGTCTACCATGTTCCTAAATTACCTG
Spinacea oleracea mRNA for chloroplast ferrodoxin:thioredoxin reductase (FTR).
X78880.1:435-458
AATTGAAGAAGAATCTGGAGAAAGTTGGAT435GCAAGGTTAAGGTGAAATCCCCTCTTAAAGTCTACCATGTTCCTAAATTACCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAGGGGATTTCACCTTAACCTTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGGGATTTCACCTTAACCTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGGGATTTCACCTTAACCTTGC&k=0&no_gap=0&offset=0&limit=50
0.194 | 0.092 | search_minus_done; http://172.18.8.135:50400/match?q=GCAAGGTTAAGGTGAAATCCCCTC&k=0&no_gap=0&offset=0&limit=50
0.196 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).