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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 19:03:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 2 from patent US 6930227.
AR706376.1:936-955
AGGGACGGATCATTCACAATTGATCATATA936GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
Sequence 3 from patent US 6930227.
AR706377.1:936-955
AGGGACGGATCATTCACAATTGATCATATA936GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
Sequence 2 from Patent EP1055727.
AX138776.1:936-955
AGGGACGGATCATTCACAATTGATCATATA936GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
Sequence 3 from Patent EP1055727.
AX138777.1:936-955
AGGGACGGATCATTCACAATTGATCATATA936GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
JP 2001037490-A/1: Gene encoding caffein synthetic system-related enzyme and utilization thereof.
BD004678.1:936-955
AGGGACGGATCATTCACAATTGATCATATA936GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
JP 2001037490-A/2: Gene encoding caffein synthetic system-related enzyme and utilization thereof.
BD004679.1:936-955
AGGGACGGATCATTCACAATTGATCATATA936GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
JP 2002085072-A/16: Gene encoding caffein synthetic system-related enzyme and utilization thereof.
BD134668.1:936-955
AGGGACGGATCATTCACAATTGATCATATA936GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
Camellia sinensis mRNA, clone: SS19C05, 5' end sequence, expressed in shoot stems.
FS953524.1:292-311
AGGGACGGATCATTCACAATTGATCATATA292GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
Camellia sinensis mRNA, clone: TB26A01, 5' end sequence, expressed in terminal buds.
FS956230.1:840-859
AGGGACGGATCATTCACAATTGATCATATA840GAGGGGTTTGATCTTGATAGCGTAGAAATGC
ZYta110 Young leaves cDNA library of tea plant (Camellia sinensis) Camellia sinensis cDNA 5', mRNA sequence.
GH159040.1:438-457
AGGGACGGATCATTCACAATTGATCATATA438GAGGGGTTTGATCTTGATAGCCTAGAAATGCAGGAGAATGATAAATGGGT
S2_P5G5_013_TRA_3897 Camellia assamica S2 cDNA library Camellia sinensis var. assamica cDNA 5', mRNA sequence.
HS398763.1:473-492
AGGGACGGATCATTCACAATTGATCATATA473GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
S5_P2F7_016_TRA_4477 Camellia assamica S5 cDNA library Camellia sinensis var. assamica cDNA 5', mRNA sequence.
HS399726.1:473-492
AGGGACGGATCATTCACAATTGATCATATA473GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
TSA: Camellia sinensis tea_rep_c951 mRNA sequence.
KA280393.1:1018-1037
AGGGACGGATCATTCACAATTGATCATATA1018GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
TSA: Camellia sinensis tea_rep_c2762 mRNA sequence.
KA282189.1:988-1007
AGGGACGGATCATTCACAATTGATCATATA988GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
Camellia sinensis TCS1 mRNA for caffeine synthase, complete cds.
AB031280.1:966-985
AGGGACGGATCATTCACAATTGATCATATA966GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
Camellia sinensis caffeine synthase gene, complete cds.
EF526217.1:6211-6230
AGGGACGGATCATTCACAATTGATCATATA6211GAGGGGTTTGATCTTGATAGCCTAGAAATGCAGGAGAATGATAAATGGGT
Camellia sinensis caffeine synthase 1 (TCS1) gene, complete cds.
JX647690.1:6668-6687
AGGGACGGATCATTCACAATTGATCATATA6668GAGGGGTTTGATCTTGATAGCCTAGAAATGCAGGAGAATGATAAATGGGT
Camellia sinensis var. assamica caffeine synthase (CkCS) mRNA, complete cds.
MN163829.1:877-896
AGGGACGGATCATTCACAATTGATCATATA877GAGGGGTTTGATCTTGATAGCGTAGAAATGCAGGAGAATGATAAATGGGT
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:11223792-11223811
TGAGCAATGGAGGAAGATGAGCGAGGTTAT11223792GAGGGGTTTGATCTTGATAGAGGAACCTGATAAGGTTGGCTGGAACCTGG
S5_P3B4_007_TRA_4514 Camellia assamica S5 cDNA library Camellia sinensis var. assamica cDNA 5', mRNA sequence.
HS399763.1:283-302
ACCCATTTATCATTCTCCTGCATTTCTACG283CTATCAAGATCAAACCCCTCTATATGATCAATTGTGAATGATCCGTCCCT
TSA: Camellia sinensis tea_s23197 mRNA sequence.
KA301623.1:272-291
ACCCATTTATCATTCTCCTGCATTTCTACG272CTATCAAGATCAAACCCCTCTATATGATCAATTGTGAATGATCCGTCCCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGGGGTTTGATCTTGATAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGGGTTTGATCTTGATAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.739 | 0.731 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGGGTTTGATCTTGATAG&k=0&no_gap=0&offset=0&limit=50
0.962 | 0.223 | search_minus_done; http://172.18.8.135:50400/match?q=CTATCAAGATCAAACCCCTC&k=0&no_gap=0&offset=0&limit=31
0.963 | 0.001 | cgi_end;

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