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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:15:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 8590 from patent US 7960612.
GY266637.1:198-220
TGCAAATAACAGTGTCAAAGCATCTATTGA198GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGAGGTGGATCCACTTCTGGGG
Sequence 13336 from patent US 8030546.
GY465561.1:198-220
TGCAAATAACAGTGTCAAAGCATCTATTGA198GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGAGGTGGATCCACTTCTGGGG
Sequence 13336 from patent US 10597667.
MO976714.1:198-220
TGCAAATAACAGTGTCAAAGCATCTATTGA198GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGAGGTGGATCCACTTCTGGGG
Lotus japonicus DNA, clone:LjB01a23_r.
AG219256.1:198-220
TCATTATTTCAGTGTCAAAGCATCTATTGA198GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGAGGTGGATCCACTTCTGGGG
mte1-51B1RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR324355.1:109-131
ACCACTTTTCAGTGTCAAAGCATCAATTGA109GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGTGCTAAATCAGCTTCTGAGT
Medicago truncatula clone mth2-76i7, complete sequence.
AC153460.24:84688-84710
ACCACTTTTCAGTGTCAAAGCATCAATTGA84688GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGTGCTAAATCAGCTTCTGAGT
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:76075854-76075876
TCATTATTTCAGTGTCAAAGCATCTATTGA76075854GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGAGGTGGATCCACTTCTGGGG
Lotus corniculatus var. japonicus MADS box protein AGb mRNA, partial cds.
AY770403.1:198-220
TGCAAATAACAGTGTCAAAGCATCTATTGA198GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGAGGTGGATCCACTTCTGGGG
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-04.
CP023116.1:5444137-5444159
TAATTATGATAGTGTCAAATCAACTATTGA5444137GAGGTACAAGAAAGCATGTTCAGATTCATCTGGTGCTGGATCTGCTTCTGAGG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 3.
CP124717.1:77635990-77636012
ACATTGGTGTAGTGTGAAAGCAACAATCGA77635990GAGGTACAAGAAAGCATGTTCAGATTCCTCAAACACTGGTTCAATATCCGAGG
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:55226662-55226684
ACTAATTTTCAGTGTGAAAGCATCTATTGA55226662GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGTGCTAAATCAGCTTCTGAGT
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:50817714-50817736
ACTAATTTTCAGTGTGAAAGCATCTATTGA50817714GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGTGCTAAATCAGCTTCTGAGT
Lycium barbarum AGAMOUS-like protein mRNA, complete cds.
GU144015.1:249-271
TGCTAACAACAGTGTGAAAGAAACAATTGA249GAGGTACAAGAAAGCATGTTCAGATTCCTCAAACACTGGTTCAATATCCGAGG
Medicago truncatula cultivar Jemalong A17 MADS-box transcription factor AGAMOUSb (AGb) mRNA, complete cds.
KF159805.1:295-317
TGCAAATAACAGTGTCAAAGCATCAATTGA295GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGTGCTAAATCAGCTTCTGAGT
Medicago truncatula AGAMOUSb (AGb) gene, complete cds.
KJ470634.1:3256-3278
ACCACTTTTCAGTGTCAAAGCATCAATTGA3256GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGTGCTAAATCAGCTTCTGAGT
Vuralia turcica floral homeotic protein AGAMOUS mRNA, complete cds.
KT760579.1:388-410
TGCTAATAACAGTGTCAAAGCAACTATTGA388GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGTGCTGGATCTGCTTCTGAGG
Medicago arabica genome assembly, chromosome: 1.
OX326964.1:61684550-61684572
ACTACTTTTCAGTGTCAAAGCATCAATTGA61684550GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGTGCTAAATCAGCTTCCGAGT
Inga laurina genome assembly, chromosome: 1.
OY979701.1:65592834-65592856
AAAAAATTGCAGTGTGAAGGCAACAATAGA65592834GAGGTACAAGAAAGCATGTTCAGATTCTTCTGGTGCTGGATCCACTTCTGAAG
mte1-83K1RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR348804.1:454-476
ACTCAGAAGCTGATTTAGCACCAGAAGAAT454CTGAACATGCTTTCTTGTACCTCTCAATTGATGCTTTGACACTGAAAAGTGGT
Medicago truncatula clone mth2-30e7, complete sequence.
AC137837.4:34365-34387
ACTCAGAAGCTGATTTAGCACCAGAAGAAT34365CTGAACATGCTTTCTTGTACCTCTCAATTGATGCTTTGACACTGAAAAGTGGT
Lotus japonicus genomic DNA, chromosome 4, clone: LjT41M05, TM0404.
AP006697.1:94143-94165
CCCCAGAAGTGGATCCACCTCCAGAAGAAT94143CTGAACATGCTTTCTTGTACCTCTCAATAGATGCTTTGACACTGAAATAATGA
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-16.
CP023128.1:5445593-5445615
CCTCAGAAGCAGATCCAGCACCAGAAGAAT5445593CTGAACATGCTTTCTTGTACCTCTCAATAGTTGCTTTGACACTGCCATAATTA
Cicer arietinum chromosome Ca6.
CP039336.1:9596660-9596682
TCTCAGAAGCAGATTTGCAACCAGAAGAAT9596660CTGAACATGCTTTCTTGTACCTCTCAATAGATGCTTTGACACTGAAAAAGTAG
Cicer arietinum chromosome Ca6.
CP040771.1:9596649-9596671
TCTCAGAAGCAGATTTGCAACCAGAAGAAT9596649CTGAACATGCTTTCTTGTACCTCTCAATAGATGCTTTGACACTGAAAAAGTAG
Trifolium subterraneum genome assembly, chromosome: 1.
OX637461.1:8398331-8398353
ACTCAGAAGCTGATTTAGCACCAGAAGAAT8398331CTGAACATGCTTTCTTGTACCTCTCAATAGATGCTTTCACACTGAAAATTAGT
Trifolium dubium genome assembly, chromosome: 10.
OX638071.1:6011218-6011240
ACTCAGAAGCTGATTTAGCACCAGAAGAAT6011218CTGAACATGCTTTCTTGTACCTCTCAATAGATGCTTTCACACTGAAAATTAGT
Trifolium dubium genome assembly, chromosome: 14.
OX638075.1:5604460-5604482
ACTCAGAAGCTGATTTAGCACCAGAAGAAT5604460CTGAACATGCTTTCTTGTACCTCTCAATAGATGCTTTCACACTGAAAATCAGT
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:9321160-9321182
ACTCAGAAGCTGATTTAGCACCAGAAGAAT9321160CTGAACATGCTTTCTTGTACCTCTCAATAGATGCTTTCACACTGAAAATTAGT
Medicago lupulina genome assembly, chromosome: 4.
OY283142.1:8579356-8579378
ACTCAGAAGCTGATTTAGCACCAGAAGAAT8579356CTGAACATGCTTTCTTGTACCTCTCAATTGAGGCCTTGACACTGAAAAGTAGT
Inga oerstediana genome assembly, chromosome: 2.
OY723400.1:24045741-24045763
CTTCAGAAGTGGATCCAGCACCAGAAGAAT24045741CTGAACATGCTTTCTTGTACCTCTCTATTGTTGCCTTCACACTGCAATTATAT
Inga leiocalycina genome assembly, chromosome: 2.
OY725321.1:22016890-22016912
CTTCAGAAGTGGATCCAGCACCAGAAGAAT22016890CTGAACATGCTTTCTTGTACCTCTCTATTGTTGCCTTCACACTGCAATTATAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGGTACAAGAAAGCATGTTCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGGTACAAGAAAGCATGTTCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.303 | 0.295 | search_plus_done; http://172.18.8.135:50400/match?q=GAGGTACAAGAAAGCATGTTCAG&k=0&no_gap=0&offset=0&limit=50
0.451 | 0.147 | search_minus_done; http://172.18.8.135:50400/match?q=CTGAACATGCTTTCTTGTACCTC&k=0&no_gap=0&offset=0&limit=32
0.460 | 0.009 | cgi_end;

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