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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:47:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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CM053B12 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence.
DR457242.1:252-271
TTATATATATCCATTTGAGACGAAAGATGG252GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
GH_LSL06F05.f GH_LSL Gossypium hirsutum cDNA clone GH_LSL06F05 5', mRNA sequence.
DV849081.1:152-171
ATCCTTCAAATCATATATTACAAAAGATGG152GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
GH_TMIRS_153_C04_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence.
DW511432.1:165-184
ATCCTTCAAATCATATATTACAAAAGATGG165GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
mhczaa0_021423.z1.scf cDNA Library of Shixiya I in the Whole-life Cycle Gossypium arboreum cDNA clone mhczaa0_021423.z1, mRNA sequence.
JG837502.1:328-347
TAATCCTTCAAATCATATTACAAAAGATGG328GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
mhczaa0_025134.z1.scf cDNA Library of Shixiya I in the Whole-life Cycle Gossypium arboreum cDNA clone mhczaa0_025134.z1, mRNA sequence.
JG838242.1:340-359
TAATCCTTCAAATCATATTACAAAAGATGG340GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
B06-GC3921 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK801559.1:208-227
TAATCCTTCAAATCATATTACAAAAGATGG208GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
C09-GC7371 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK803722.1:40-59
TAATCCTTCAAACCATATTACAAAAGATGG40GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
B08-GC1122 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK804246.1:45-64
TAATCCTTCAAATCATATTACAAAAGATGG45GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
C05-GC3934 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK809123.1:40-59
TAATCCTTCAAATCATATTACAAAAGATGG40GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
F10-GC10934 Gossypium barbadense L. line Hai7124 6 to 24 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK810472.1:208-227
TAATCCTTCAAATCATATTACAAAAGATGG208GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
Gossypium herbaceum isolate Zhongcao1 chromosome 1.
CP106687.1:7066593-7066612
TAATCCTTCAAATCATATTACAAAAGATGG7066593GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
Gossypium rotundifolium isolate GPK201 chromosome 1.
CP106722.1:11248444-11248463
TAATCCTTCAAATAATATTGCAAAAGATGG11248444GAGTAGAAGGCACCTTGGAATACATCTCTGATTTGCTTAGCAGCGTGAAG
GH_TMIRS_153_C04_R Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence.
DW511433.1:460-479
CTTCACGCTGCTAAGCAAATCAGAGATGTA460TTCCAAGGTGCCTTCTACTCCCATCTTTTGTAATATATGATTTGAAGGAT
rayctn0_0134_E08.ab1 cotton shoot apical meristems, buds and flowers Gossypium hirsutum cDNA 3', mRNA sequence.
HO099568.1:486-505
CTTCACGCTGCTAAGCAAATCAGAGATGTA486TTCCAAGGTGCCTTCTACTCCCATCTTTTGTAATATGATTTGAAGGATTA
Gossypioides kirkii clone GKH058K14-jmr, complete sequence.
AC243092.1:109356-109375
CTTCACGCTGCTAAGCAAATCAGAGATGTA109356TTCCAAGGTGCCTTCTACTCCCATCTTGATTTGAAGGATTAGTATACTGG
Gossypium raimondii clone GR__Ba0142D21-hnv, complete sequence.
AC243121.1:81540-81559
CTTCACGCTGCTAAGCAAATCAGAGATGTA81540TTCCAAGGTGCCTTCTACTCCCATCTTTTGTAATATGATTTGAAGGATTA
Gossypioides kirkii chromosome KI_01.
CP032244.1:34162230-34162249
CTTCACGCTGCTAAGCAAATCAGAGATGTA34162230TTCCAAGGTGCCTTCTACTCCCATCTTGATTTGAAGGATTAGTATACTGG
Gossypium raimondii isolate D5-4 chromosome D5_01.
CP032553.1:51547911-51547930
CTTCACGCTGCTAAGCAAATCAGAGATGTA51547911TTCCAAGGTGCCTTCTACTCCCATCTTTTGTAATATGATTTGAAGGATTA
Gossypium herbaceum isolate GPA1alz chromosome 1.
CP106699.1:118680426-118680445
CTTCACGCTGCTAAGCAAATCAGAGATGTA118680426TTCCAAGGTGCCTTCTACTCCCATCTTTTGTAATATGATTTGAAGGATTA
Gossypium bickii isolate GPG1lz chromosome 1.
CP106715.1:121655566-121655585
CTTCACGCTGCTAAGCAAATCAGAGATGTA121655566TTCCAAGGTGCCTTCTACTCCCATCTTTTGTAATACGATTTGAAGGATTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR812263.1:520890525-520890544
TCAACTTGAAGCTTCATATGCTAAAGAGCT520890525TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828089.1:499755527-499755546
TCAACTTGAAGCTTCATATGCTAAAGAGCT499755527TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828110.1:484505220-484505239
TCAACTTGAAGCTTCATATGCTAAAGAGCT484505220TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828134.1:528166142-528166161
TCAACTTGAAGCTTCATATGCTAAAGAGCT528166142TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828141.1:536363228-536363247
TCAACTTGAAGCTTCATATGCTAAAGAGCT536363228TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828183.1:502888452-502888471
TCAACTTGAAGCTTCATATGCTAAAGAGCT502888452TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OU015683.1:511689365-511689384
TCAACTTGAAGCTTCATATGCTAAAGAGCT511689365TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OU015703.1:516088525-516088544
TCAACTTGAAGCTTCATACGCTAAAGAGCT516088525TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX459911.1:497914878-497914897
TCAACTTGAAGCTTCATATGCTAAAGAGCT497914878TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX459925.1:497503231-497503250
TCAACTTGAAGCTTCATATGCTAAAGAGCT497503231TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX459932.1:499648386-499648405
TCAACTTGAAGCTTCATATGCTAAAGAGCT499648386TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX459972.1:501640997-501641016
TCAACTTGAAGCTTCATATGCTAAAGAGCT501640997TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460007.1:503434655-503434674
TCAACTTGAAGCTTCATACGCTAAAGAGCT503434655TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460014.1:503449037-503449056
TCAACTTGAAGCTTCATATGCTAAAGAGCT503449037TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460021.1:497525721-497525740
TCAACTTGAAGCTTCATATGCTAAAGAGCT497525721TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460028.1:497237740-497237759
TCAACTTGAAGCTTCATATGCTAAAGAGCT497237740TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460049.1:500239297-500239316
TCAACTTGAAGCTTCATACGCTAAAGAGCT500239297TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460056.1:494878981-494879000
TCAACTTGAAGCTTCATATGCTAAAGAGCT494878981TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460062.1:496358652-496358671
TCAACTTGAAGCTTCATATGCTAAAGAGCT496358652TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460070.1:500595925-500595944
TCAACTTGAAGCTTCATATGCTAAAGAGCT500595925TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460077.1:494544637-494544656
TCAACTTGAAGCTTCATATGCTAAAGAGCT494544637TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460091.1:504243166-504243185
TCAACTTGAAACTTCATATGCTAAAGAGCT504243166TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460119.1:499093010-499093029
TCAACTTGAAGCTTCATATGCTAAAGAGCT499093010TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460203.1:501483490-501483509
TCAACTTGAAGCTTCATATGCTAAAGAGCT501483490TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460224.1:496655610-496655629
TCAACTTGAAGCTTCATATGCTAAAGAGCT496655610TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460280.1:495938607-495938626
TCAACTTGAAGCTTCATATGCTAAAGAGCT495938607TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX460308.1:496867963-496867982
TCAACTTGAAGCTTCATATGCTAAAGAGCT496867963TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX590736.1:497209163-497209182
TCAACTTGAAGCTTCATATGCTAAAGAGCT497209163TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX638655.1:503068272-503068291
TCAACTTGAAGCTTCATATGCTAAAGAGCT503068272TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638744.1:498151456-498151475
TCAACTTGAAGCTTCATATGCTAAAGAGCT498151456TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare genome assembly, chromosome: 3H.
OX638758.1:498193719-498193738
TCAACTTGAAGCTTCATATGCTAAAGAGCT498193719TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638765.1:502202151-502202170
TCAACTTGAAGCTTCATATGCTAAAGAGCT502202151TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638800.1:495994983-495995002
TCAACTTGAAGCTTCATATGCTAAAGAGCT495994983TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638814.1:508378155-508378174
TCAACTTGAAGCTTCATATGCTAAAGAGCT508378155TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638870.1:502350214-502350233
TCAACTTGAAACTTCATATGCTAAAGAGCT502350214TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638877.1:501989047-501989066
TCAACTTGAAGCTTCATATGCTAAAGAGCT501989047TTCCAAGGTGCCTTCTACTCTTATTGCTAATGATGATGCTTGTGCTACTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGTAGAAGGCACCTTGGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGTAGAAGGCACCTTGGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.226 | 1.218 | search_plus_done; http://172.18.8.135:50400/match?q=GAGTAGAAGGCACCTTGGAA&k=0&no_gap=0&offset=0&limit=50
1.520 | 0.293 | search_minus_done; http://172.18.8.135:50400/match?q=TTCCAAGGTGCCTTCTACTC&k=0&no_gap=0&offset=0&limit=38
1.548 | 0.028 | cgi_end;

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