GGGenome | Results

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2025-04-06 21:22:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Pyrus pyrifolia mRNA, contig: contig_5992revcomp.
FX412961.1:540-562

TGGCCGGAAAGTCGATGAGAGAGTGAGAAA540GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:1649531-1649553

GTTGCCCGGAAAGTCGATGAGAGAGTAGGA1649531GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:1687256-1687278

GTTGCCCGGAAAGTCGATGAGAGAGAGAGA1687256GAGTGAGAAAACGAAGGAAAACGAAGGAAAACGATGGAAAATGCGGGAAAGTT

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:1810255-1810277

AGAAATGGGTTGCCCGGAAAGTCGATCAGA1810255GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:1818179-1818201

TGCCCGGAAAGTCAATGAGAGAGTGAGAAA1818179GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:7606465-7606487

TGGCCGGAAAGTCGATGACAGAGTGAGAAA7606465GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Malus hybrid cultivar cultivar Flame chromosome 6.
CP141932.1:8019284-8019306

TGGCCGGAAAGTCGATGAGAGAGTGAGAAA8019284GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:1698090-1698112

GTTGCCCGGAAAGTCGATGAGAGAGTAGGA1698090GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTGGTCTTGGA

Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141961.1:7389314-7389336

TGGCCGGAAAGTCGATGAGAGAGTGAGAAA7389314GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141978.1:7559044-7559066

TGGCCGGAAAGTCGATGAGAGAGTGAGAAA7559044GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Malus x robusta genome assembly, chromosome: 2.
OY720326.1:1962005-1962027

GTTGCCCGGAAAGTCGATGAGAGAGTAAGA1962005GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:1905824-1905846

TGCCCGGAAAGTCAATGAGAGAGTGAGAAA1905824GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:1922618-1922640

GCAGAAATGGGTTGCCCGGAAAGTCAATGA1922618GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:2059857-2059879

GCTGCCCGGAAAGTCAATGAGAGAGTGAGA2059857GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Crataegus laevigata genome assembly, chromosome: 13.
OY756950.1:8489438-8489460

TGGCCGGAAAGTCGACGAGAGAGTGAGAAA8489438GAGTGAGAAAACGAAGGAAAACGATGGAAAATGTGGGAAAGTTTTGGTCTTGG

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH012_02254m, 5' end sequence.
AB450699.1:119-141

CCAAGACCAAAGCTTTCCCACATTTTCCAT119CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Mdfr3022m18.y1 Mdfr Malus domestica cDNA clone Mdfr3022m18 5' similar to TR:O81020 O81020 F12C20.9 PROTEIN, mRNA sequence.
CO753033.1:218-240

CCAAGACCAAAACTTTCCCACATTTTCCAT218CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

000512AENA001618HT (AENA) Northern Spy expanding leaf Malus domestica cDNA clone AENA001618, mRNA sequence.
EB112774.1:37-59

CCAANACCAAAACTTTCCCACATTTTCCAT37CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

010616AVBC004435HT (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC004435, mRNA sequence.
EB127293.1:214-236

CCAAGACCAAAACTTTCCCACATTTTCCAT214CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

020801AVBC009549HT (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC009549, mRNA sequence.
EB131100.1:204-226

CCAAGACCAAAACTTTCCCACATTTTCCAT204CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

010513AAXA001062HT (AAXA) Royal Gala 126 DAFB fruit core Malus domestica cDNA clone AAXA001062, mRNA sequence.
EB134705.1:242-264

CCAAGACCAAAACTTTCCCACATTTTCCAT242CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

030109ABLC001280HT (ABLC) Braeburn cell culture three days after subculture Malus domestica cDNA clone ABLC001280, mRNA sequence.
EB155483.1:215-237

CCAAGACCAAAACTTTCCCACATTTTCCAT215CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

030121ABLC002259HT (ABLC) Braeburn cell culture three days after subculture Malus domestica cDNA clone ABLC002259, mRNA sequence.
EB155746.1:217-239

CCAAGACCAAAACTTTCCCACATTTTCCAT217CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

030123ABLC003418HT (ABLC) Braeburn cell culture three days after subculture Malus domestica cDNA clone ABLC003418, mRNA sequence.
EB156089.1:207-229

CCAAGACCAAAACTTTCCCACATTTTCCAT207CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

030124ABLC006011HT (ABLC) Braeburn cell culture three days after subculture Malus domestica cDNA clone ABLC006011, mRNA sequence.
EB156533.1:37-59

CCAAGACCAAAACTTTCCCACATTTTCCAT37CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

030128ABLC005248HT (ABLC) Braeburn cell culture three days after subculture Malus domestica cDNA clone ABLC005248, mRNA sequence.
EB156653.1:223-245

CCAAGACCAAAACTTTCCCACATTTTCCAT223CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

030128ABLC005341HT (ABLC) Braeburn cell culture three days after subculture Malus domestica cDNA clone ABLC005341, mRNA sequence.
EB156670.1:215-237

CCAAGACCAAAACTTTCCCACATTTTCCAT215CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

030212ABQA001934HT (ABQA) Royal Gala flower Malus domestica cDNA clone ABQA001934, mRNA sequence.
EB157078.1:223-245

CCAAGACCAAAACTTTCCCACATTTTCCAT223CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Pyrus pyrifolia mRNA, clone: NFR1_02_54, 5' end sequence, expressed in fruit.
HX745837.1:119-141

CCAAGACCAAAGCTTTCCCACATTTTCCAT119CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Pyrus pyrifolia mRNA, clone: NFR3_20_20, 5' end sequence, expressed in fruit.
HX752814.1:117-139

CCAAGACCAAAGCTTTCCCACATTTTCCAT117CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

TSA: Pyrus x bretschneideri Unigene10668_XinShao mRNA sequence.
JR605726.1:299-321

CCAAGACCAAAGCTTTCCCACATTTTCCAT299CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:44815953-44815975

CCAAGACCAAAACTTTCCCACATTTTCCAT44815953CGTTTTCCTTCGTTTTCTCACTCTCTCACTCTCTCATCGACTTTCCGGGCAAC

Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143363.1:27402612-27402634

CCAAGACCAAAACTTTCCCACATTTTCCAT27402612CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143380.1:24723096-24723118

CCAAGACCAAAACTTTCCCACATTTTCCAT24723096CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Malus sylvestris genome assembly, chromosome: 6.
OU696508.1:27390943-27390965

CCAAGACCAAAACTTTCCCACATTTTCCAT27390943CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Malus domestica genome assembly, chromosome: 5.
OU696681.1:44472117-44472139

CCAAGACCAAAACTTTCCCACATTTTCCAT44472117CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATTGACTTTCCGGGCA

Malus domestica genome assembly, chromosome: 6.
OU696682.1:27698089-27698111

CCAAGACCAAAACTTTCCCACATTTTCCAT27698089CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Malus domestica genome assembly, chromosome: 5.
OU744546.1:43945574-43945596

CCAAGACCAAAACTTTCCCACATTTTCCAT43945574CGTTTTCCTTCGTTTTCTCACTCTCTCACTCTCTCATCGACTTTCCGGGCAAC

Malus domestica genome assembly, chromosome: 6.
OU744547.1:27458461-27458483

CCAAGACCAAAACTTTCCCACATTTTCCAT27458461CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Malus domestica genome assembly, chromosome: 5.
OU744957.1:44382202-44382224

CCAAGACGAAAACTTTCCCACATTTTCCAT44382202CGTTTTCCTTCGTTTTCTCACTCTCTCACTCTCTCTCACTCTCTCATCGACTT

Malus domestica genome assembly, chromosome: 5.
OU744957.1:44444993-44445015

CCAAGACCAAAACTTTCCCACATTTTCCAT44444993CGTTTTCCTTCGTTTTCTCACTCTCTCACTCTCTCGTCGACTTTCCGGGCAAC

Malus domestica genome assembly, chromosome: 6.
OU744958.1:27318509-27318531

CCAAGACCAAAACTTTCCCACATTTTCCAT27318509CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Malus domestica genome assembly, chromosome: 5.
OU744995.1:45149078-45149100

CCAAGACCAAAACTTTCCCACATTTTCCAT45149078CGTTTTCCTTCGTTTTCTCACTCTCTTACTCTCTCATCGACTTTCCGGGCAAC

Malus domestica genome assembly, chromosome: 6.
OU744996.1:23537356-23537378

CCAAGACCAAAACTTTCCCACATTTTCCAT23537356CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Malus x robusta genome assembly, chromosome: 14.
OY720338.1:23356603-23356625

CCAAGACCAAAACTTTCCCACATTTTCCAT23356603CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCATCGACTTTCCGGCCA

Pyrus communis genome assembly, chromosome: 12.
OY757079.1:20278468-20278490

CCAAGACCAAAACTTTCCCACATTTTCCAT20278468CGTTTTCCTTCGTTTTCTCACTCTTTCTCACTCTCTCAGCGACTTTCCGGCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

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Debug Info:

0.009 | 0.009 | search_start;
0.126 | 0.117 | search_plus_done; http://172.18.8.135:50400/match?q=GAGTGAGAAAACGAAGGAAAACG&k=0&no_gap=0&offset=0&limit=50
0.857 | 0.731 | search_minus_done; http://172.18.8.135:50400/match?q=CGTTTTCCTTCGTTTTCTCACTC&k=0&no_gap=0&offset=0&limit=35
0.878 | 0.021 | cgi_end;

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