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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 07:22:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:57327595-57327614
CATCGAGAGGTTTGAGATATGATTCGAAGT57327595GAGTGATCTGAGTCGAAAGGATGAAGGTTTTGGTATAATATATATAAACT
BOGTY84TR BOGT Brassica oleracea genomic clone BOGTY84, genomic survey sequence.
BH484962.1:647-666
AGTTTATATATATTATACCAAAACCTCCAT647CCTTTCGACTCAGATCACTCACTTCGAATCATATCTCAAACCTCTCGATG
odi68d06.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH954002.1:368-387
AGTTTATATATATTATACCAAAACCTCCAT368CCTTTCGACTCAGATCACTCACTTCGAATCATATCTCAAACCTCTCGATG
BOOAU19TF BO_1.6_2_KB_tot Brassica oleracea genomic clone BOOAU19, genomic survey sequence.
BZ457334.1:778-797
AGTTTATATATATTATACCAAAACCTCCAT778CCTTTCGACTCAGATCACTCACTTCGAATCATATCTCAAACCTCTCGATG
BOOAU19TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BOOAU19, genomic survey sequence.
BZ457343.1:832-851
AGTTTATATATATTATACCAAAACCTCCAT832CCTTTCGACTCAGATCACTCACTTCGAATCATATCTCCAACCTCTCGATG
BOIGM43TF BO_1.4_1.6_KB_nuc Brassica oleracea genomic clone BOIGM43, genomic survey sequence.
CC949283.1:340-359
AGTTTATATATATTATACCAAAACCTCCAT340CCTTTCGACTCAGATCACTCACTTCGAATCATATCTCAAACCTCTCGATG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB002P01, complete sequence.
AC232438.1:81690-81709
ACTTTATATATATTATACCAAAACCTTCAT81690CCTTTCGACTCAGATCACTCACTTCGAATCAAATCTAAAACCTCTCGATG
Brassica napus genome assembly, chromosome: C03.
HG994367.1:21872034-21872053
AGTTTATATATATTATACCAAAACCTTCAT21872034CCTTTCGACTCAGATCACTCACTTCGAATCATATCTCAAACCTCTCGATG
Brassica oleracea HDEM genome, scaffold: C3.
LR031872.1:21660194-21660213
AGTTTATATATATTATACCAAAACCTCCAT21660194CCTTTCGACTCAGATCACTCACTTCGAATCATATCTCAAACCTCTCGATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GAGTGATCTGAGTCGAAAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GAGTGATCTGAGTCGAAAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.373 | 0.364 | search_plus_done; http://172.18.8.135:50400/match?q=GAGTGATCTGAGTCGAAAGG&k=0&no_gap=0&offset=0&limit=50
0.504 | 0.131 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTTCGACTCAGATCACTC&k=0&no_gap=0&offset=0&limit=49
0.509 | 0.005 | cgi_end;

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