GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 07:24:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 3, clone: LjB72A14, BM1187.
AP007879.2:65532-65552
TTGATCCTACTGTTTTTCTTTTATCATATA65532GATAAATGGTAAGTCAGTGGCTTGTCTTGGTCTCAATGAATTTGTGTGGAT
Lotus japonicus genomic DNA, clone: LjT22H07, TM1476.
AP010203.1:62670-62690
AGAATGAAGAATAAACCTATCAGAGACTAA62670GATAAATGGTAAGTCAGTGGCTTGTCTTGGTCTCAATGAATATGTGTGGAT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:1722107-1722127
TTGATCCTACTGTTTTTCTTTTATCATATA1722107GATAAATGGTAAGTCAGTGGCTTGTCTTGGTCTCAATGAATTTGTGTGGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GATAAATGGTAAGTCAGTGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GATAAATGGTAAGTCAGTGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=GATAAATGGTAAGTCAGTGGC&k=0&no_gap=0&offset=0&limit=50
0.132 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=GCCACTGACTTACCATTTATC&k=0&no_gap=0&offset=0&limit=47
0.132 | 0.000 | cgi_end;

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