GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 07:15:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:121717402-121717421
GGGTATCCGGTTTTGTGGCCTAATGGTGAT121717402GATAATTACCCGCCTGCTGATATTTGGGATTATGGTAATGATCCCTTCTT
KS24012E09 KS24 Capsicum annuum cDNA, mRNA sequence.
GD119015.1:365-384
AAGAAGGGATCATTACCATAATCCCAAATA365TCAGCAGGCGGGTAATTATCATCACCATTAGGCCACAAAACCGGATACCC
TSA: Capsicum annuum MGMT_Contig15542, mRNA sequence.
JW065786.1:333-352
AAGAAGGGATCATTACCATAATCCCAAATA333TCAGCAGGCGGGTAATTATCATCACCATTAGGCCACAAAACCGGATACCC
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:168588823-168588842
AAGAAGGGATCATTACCATAATCCCAAATA168588823TCAGCAGGCGGGTAATTATCATCACCATTAGGCCACAAAACCGGATACCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GATAATTACCCGCCTGCTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GATAATTACCCGCCTGCTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=GATAATTACCCGCCTGCTGA&k=0&no_gap=0&offset=0&limit=50
0.201 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=TCAGCAGGCGGGTAATTATC&k=0&no_gap=0&offset=0&limit=49
0.203 | 0.002 | cgi_end;

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