GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 17:04:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus domestica genome assembly, chromosome: 2.
OU744954.1:3447792-3447813
ACAATAAGAAAACTTTTTTTGAGAGTTCAT3447792GATATCCTTTGTTTGGACAACCATTTCCAAAGGCATGCCAACTAAAGAGCTC
Malus x domestica NBS-LRR resistance gene-like protein ARGH17 gene, partial cds.
AY369216.1:433-454
GAGCTCTTTAGTTGGCATGCCTTTGGAAAT433GGTTGTCCAAACAAAGGATATCATGAACTCTCAAAAAAAGTTTTCTTATTGT
Malus x domestica clone Florina BAC 36I17, complete sequence.
GU295057.1:15045-15066
GAGCTCTTTAGTTGGCATGCCTTTGGAAAT15045GGTTGTCCAAACAAAGGATATCATGAACTCTCAAAAAAAGTTTTCTTATTGT
Malus domestica cultivar GMAL 2473 clone BAC 32A4 Rvi15 scab resistance gene locus, partial sequence.
KF055410.1:7685-7706
GAGCTCTTTAGTTGGCATGCCTTTGGAAAT7685GGTTGTCCAAACAAAGGATATCATGAACTCTCAAAAAAAGTTGTTTCTTATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GATATCCTTTGTTTGGACAACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GATATCCTTTGTTTGGACAACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=GATATCCTTTGTTTGGACAACC&k=0&no_gap=0&offset=0&limit=50
0.117 | 0.024 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTGTCCAAACAAAGGATATC&k=0&no_gap=0&offset=0&limit=49
0.119 | 0.002 | cgi_end;

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