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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-25 01:46:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 121157 from Patent WO2008034648.
FB901884.1:424-443
CACAGCTCAAATGTGATGCTCTACTCCAAA424GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Sequence 125042 from Patent WO2008034648.
FB905769.1:424-443
CACAGCTCAAATGTGATGCTCTACTCCAAA424GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Sequence 134377 from Patent WO2008034648.
FB915104.1:424-443
CACAGCTCAAATGTGATGCTCTACTCCAAA424GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Sequence 121157 from Patent EP2090662.
HB771943.1:424-443
CACAGCTCAAATGTGATGCTCTACTCCAAA424GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Sequence 125042 from Patent EP2090662.
HB775828.1:424-443
CACAGCTCAAATGTGATGCTCTACTCCAAA424GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Sequence 134377 from Patent EP2090662.
HB785163.1:424-443
CACAGCTCAAATGTGATGCTCTACTCCAAA424GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Glycine max cDNA clone: GMFL01-50-D17, 5'end.
BW683016.1:471-490
CACAGCTCAAATGTGATGCTCTACTCCAAA471GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
sat66e06.y1 Gm-c1056 Glycine soja cDNA clone SOYBEAN CLONE ID: Gm-c1056-6371 5' similar to SW:RK24_PEA P11893 50S RIBOSOMAL PROTEIN L24, CHLOROPLAST PRECURSOR, mRNA sequence.
CA783014.1:267-286
CACAGCTCAAATGTGATGCTCTACTCCAAA267GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Glycine max cDNA, clone: GMFL02-01-B05, 5'end.
DB955483.1:455-474
CACAGCTCAAATGTGATGCTCTACTCCAAA455GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Glycine max cDNA, clone: GMFL02-03-O08, 5'end.
DB956478.1:455-474
CACAGCTCANATGTGATGCTCTACTCCAAA455GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Glycine max cDNA, clone: GMFL02-35-P17, 5'end.
DB967952.1:476-495
CACAGCTCAAATGTGATGCTCTACTCCAAA476GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Glycine max cDNA, clone: GMFL02-03-O08, 3'end.
DB974876.1:175-194
CACAGCTCAAATGTGATGCTCTACTCCAAA175GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
GLMCC27TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence.
EV274950.1:506-525
CACAGCTCAAATGTGATGCTCTACTCCAAA506GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
GLMD150TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence.
EV277184.1:478-497
CACAGCTCAAATGTGATGCTCTACTCCAAA478GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
GLNAL03TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV279713.1:479-498
CACAGCTCAAATGTGATGCTCTACTCCAAA479GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
GLLD971TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence.
FG990836.1:501-520
CACAGCTCAAATGTGATGCTCTACTCCAAA501GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
GLME471TFB JCVI-SOY2 Glycine max cDNA 5', mRNA sequence.
FK008684.1:501-520
CACAGCTCAAATGTGATGCTCTACTCCAAA501GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAACGGTAA
GLNCZ09TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
FK018406.1:472-491
CACAGCTCAAATGTGATGCTCTACTCCAAA472GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
ocpsga0_0193_G01.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO023558.1:503-522
CACAGCTCAAATGTGATGCTCTACTCCAAA503GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Glycine max cDNA, clone: GMFL01-08-A14.
AK285359.1:489-508
CACAGCTCAAATGTGATGCTCTACTCCAAA489GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Soybean clone JCVI-FLGm-5D9 unknown mRNA.
BT090855.1:501-520
CACAGCTCAAATGTGATGCTCTACTCCAAA501GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Glycine max cultivar Williams 82 chromosome 13.
CP126438.1:39029697-39029716
CACAGCTCAAATGTGATGCTCTACTCCAAA39029697GATCAGAAGGTAGCAAGCCGTGTGGGGCATAAAGTCCTTGATAATGGTAA
Glycine max cDNA clone: GMFL01-08-A14, 3'end.
BW655315.1:335-354
TTACCATTATCAAGGACTTTATGCCCCACA335CGGCTTGCTACCTTCTGATCTTTGGAGTAAAGCATCACATTTGAGCTGTG
Glycine max cDNA clone: GMFL01-50-D17, 3'end.
BW683017.1:317-336
TTACCATTATCAAGGACTTTATGCCCCACA317CGGCTTGCTACCTTCTGATCTTTGGA
Gm_ck16261 Soybean induced by Salicylic Acid Glycine max cDNA 3', mRNA sequence.
CD396053.1:109-128
TTACCATTATCAAGGACTTTATGCCCCACA109CGGCTTGCTACCTTCTGATCTTTGGAGTAGAGCATCACATTTGAGCTGTG
Gm_ck17228 Soybean induced by Salicylic Acid Glycine max cDNA 3', mRNA sequence.
CD396805.1:357-376
TTACCATTATCAAGGACTTTATGCCCCACA357CGGCTTGCTACCTTCTGATCTTAGGAGTAGAGCATCACATTTGAGCCTCG
Vigna angularis mRNA, clone: VES08K22.
HX945356.1:304-323
TTACCATTATCAAGGACTTTGTGTCCCACA304CGGCTTGCTACCTTCTGATCTTTCGAGTACAGCATCACATTTGAGCTGTG
Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
AP015040.1:10674646-10674665
TTACCATTATCAAGGACTTTGTGTCCCACA10674646CGGCTTGCTACCTTCTGATCTTTCGAGTACAGCATCACATTTGAGCTGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GATCAGAAGGTAGCAAGCCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GATCAGAAGGTAGCAAGCCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.209 | 1.200 | search_plus_done; http://172.18.8.135:50400/match?q=GATCAGAAGGTAGCAAGCCG&k=0&no_gap=0&offset=0&limit=50
1.496 | 0.288 | search_minus_done; http://172.18.8.135:50400/match?q=CGGCTTGCTACCTTCTGATC&k=0&no_gap=0&offset=0&limit=28
1.500 | 0.004 | cgi_end;

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