GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 17:05:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 20605 from Patent WO2008034648.
FB801332.1:71-90
ACCCGTCGTTGGAGGCTCGCCAGCGATGGA71GATCATCAGTCTCCATCGTCAAAAATCGAGCCCGCCGTTTCCGTATGATC
Sequence 55997 from Patent WO2008034648.
FB836724.1:71-90
ACCCGTCGTTGGAGGCTCGCCAGCGATGGA71GATCATCAGTCTCCATCGTCAAAAATCGAGCCCGCCGTTTCCGTATGATC
Sequence 88232 from Patent WO2008034648.
FB868959.1:71-90
ACCCGTCGTTGGAGGCTCGCCAGCGATGGA71GATCATCAGTCTCCATCGTCAAAAATCGAGCCCGCCGTTTCCGTATGATC
Sequence 107159 from Patent WO2008034648.
FB887886.1:71-90
ACCCGTCGTTGGAGGCTCGCCAGCGATGGA71GATCATCAGTCTCCATCGTCAAAAATCGAGCCCGCCGTTTCCGTATGATC
Sequence 20605 from Patent EP2090662.
HB671391.1:71-90
ACCCGTCGTTGGAGGCTCGCCAGCGATGGA71GATCATCAGTCTCCATCGTCAAAAATCGAGCCCGCCGTTTCCGTATGATC
Sequence 55997 from Patent EP2090662.
HB706783.1:71-90
ACCCGTCGTTGGAGGCTCGCCAGCGATGGA71GATCATCAGTCTCCATCGTCAAAAATCGAGCCCGCCGTTTCCGTATGATC
Sequence 88232 from Patent EP2090662.
HB739018.1:71-90
ACCCGTCGTTGGAGGCTCGCCAGCGATGGA71GATCATCAGTCTCCATCGTCAAAAATCGAGCCCGCCGTTTCCGTATGATC
Sequence 107159 from Patent EP2090662.
HB757945.1:71-90
ACCCGTCGTTGGAGGCTCGCCAGCGATGGA71GATCATCAGTCTCCATCGTCAAAAATCGAGCCCGCCGTTTCCGTATGATC
Sequence 183857 from Patent EP2090662.
HB834643.1:71-90
ACCCGTCGTTGGAGGCTCGCCAGCGATGGA71GATCATCAGTCTCCATCGTCAAAAATCGAGCCCGCCGTTTCCGTATGATC
Brassica oleracea var. viridis mRNA, clone: KALE-023P13, 5' end sequence.
DK464713.1:203-222
ACCCGTCGCTGGAGGCTCGCCAGCGATGGA203GATCATCAGTCTCCATCGTCAAAAATCGAGCTCGTTCGTTTCCGTATGAT
Brassica oleracea var. viridis mRNA, clone: KALE-059D18, 5' end sequence.
DK478189.1:215-234
ACCCGTCGCTGGAGGCTCGCCAGCGATGGA215GATCATCAGTCTCCATCGTCAAAAATCGAGCTCGTCGTTTCCGTATGATC
Brassica oleracea var. viridis mRNA, clone: KALE-077D03, 5' end sequence.
DK485063.1:214-233
ACCCGTCGCTGGAGGCTCGCCAGCGATGGA214GATCATCAGTCTCCATCGTCAAAAATCGAGCTCGTCGTTTCCGTATGATC
Brassica oleracea var. viridis mRNA, clone: KALE-081A05, 5' end sequence.
DK486525.1:101-120
ACCCGTCGCTGGAGGCTCGCCAGCGATGGA101GATCATCAGTCTCCATCGTCAAAAATCGAGCTCGTCGTTTCCGTATGATC
Brassica oleracea var. viridis mRNA, clone: KALE-086O10, 5' end sequence.
DK488780.1:215-234
ACCCGTCGCTGGAGGCTCGCCAGCGATGGA215GATCATCAGTCTCCATCGTCAAAAATCGAGCTCGTCGTTTCCGTATGATC
B.oleracea BCA1 mRNA for Ca2+-ATPase.
X99972.1:172-191
ACCCGTCGTTGGAGGCTCGCCAGCGATGGA172GATCATCAGTCTCCATCGTCAAAAATCGAGCCCGCCGTTTCCGTATGATC
KR 1020130130499-A/3: Biomarker for early selection of calcium deficiency insensitive line in Brassica oleracea and uses thereof.
DI341555.1:710-729
GATCATACGGAAACGACGAGCTCGATTTTT710GACGATGGAGACTGATGATCTCCATCGCTGGCGAGCCTCCAGCGACGGGT
BOGLU73TR BOGL Brassica oleracea genomic clone BOGLU73, genomic survey sequence.
BH589882.1:476-495
GATCATACGGAAACGACGAGCTCGATTTTT476GACGATGGAGACTGATGATCTCCATCGCTGGCGAGCCTCCAACGACGGGT
odi58f03.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH926341.1:142-161
GATCATACGGAAACGACGAGCTCGATTTTT142GACGATGGAGACTGATGATCTCCATCGCTGGCGAGCCTCCAACGACGGGT
Brassica napus cultivar Xiang5A chromosome 12.
CP123887.1:35235074-35235093
GATCATACGGAAACGACGAGCTCGATTTTT35235074GACGATGGAGACTGATGATCTCCATCGCTGGCGAGCCTCCAACGACGGGT
Brassica napus genome assembly, chromosome: C06.
HG994370.1:28796190-28796209
GATCATACGGAAACGACGAGCTCGATTTTT28796190GACGATGGAGACTGATGATCTCCATCGCTGGCGAGCCTCCAACGACGGGT
Brassica oleracea HDEM genome, scaffold: C6.
LR031880.1:25440675-25440694
GATCATACGGAAACGACGAGCTCGATTTTT25440675GACGATGGAGACTGATGATCTCCATCGCTGGCGAGCCTCCAACGACGGGT
Potentilla sterilis genome assembly, chromosome: 2.
OY821755.1:19892222-19892241
ATTGCAGATACGAGAAGGTTGAACAAGCTA19892222GACGATGGAGACTGATGATCCAAGTACTGAAGTTGAAATATACCAAAACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GATCATCAGTCTCCATCGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GATCATCAGTCTCCATCGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.829 | 0.820 | search_plus_done; http://172.18.8.135:50400/match?q=GATCATCAGTCTCCATCGTC&k=0&no_gap=0&offset=0&limit=50
0.964 | 0.136 | search_minus_done; http://172.18.8.135:50400/match?q=GACGATGGAGACTGATGATC&k=0&no_gap=0&offset=0&limit=35
0.969 | 0.005 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).