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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:46:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

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UCRCS09_49G07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-49G07-M14-1-7.b, mRNA sequence.
CX053082.1:891-910
TGACCAATACGAGCCTTGGCCATGACGGGG891GATGGTGACGGACTGTTTGAT
Citrus sinensis genome assembly, chromosome: 9.
OY754326.1:8819721-8819740
GTGGCCAATACGAGCCTTGGCCATGACGGG8819721GATGGTGACGGACTGTTTGATTTCCTTGATAAGTTGCGGGTCAGACATGC
Sequence 2876 from patent US 9096865.
HL038521.1:351-370
GCATGTCTGACCCGCAACTTATCAAGGAAA351TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
Sequence 2876 from Patent EP2440033.
JC300430.1:351-370
GCATGTCTGACCCGCAACTTATCAAGGAAA351TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
Sequence 2876 from patent US 10006040.
MI841375.1:351-370
GCATGTCTGACCCGCAACTTATCAAGGAAA351TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
Sequence 2876 from patent US 10791690.
MV738696.1:351-370
GCATGTCTGACCCGCAACTTATCAAGGAAA351TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
Sequence 2876 from patent US 11286495.
MY951883.1:351-370
GCATGTCTGACCCGCAACTTATCAAGGAAA351TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
UCRCS01_05ad03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05ad03, mRNA sequence.
CB292808.1:318-337
GCATGTCTGACCCGCAACTTATCAAGGAAA318TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
UCRCS04_0005B10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005B10, mRNA sequence.
CN184155.1:313-332
GCATGTCTGACCCGCAACTTATCAAGGAAA313TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
UCRCS05_0004P24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P24, mRNA sequence.
CN187783.1:317-336
GCATGTCTGACCCGCAACTTATCAAGGAAA317TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
UCRCS05_0006F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006F10, mRNA sequence.
CN188576.1:307-326
GCATGTCTGACCCGCAACTTATCAAGGAAA307TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
UCRCS06_0004K23_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0004K23, mRNA sequence.
CN191162.1:311-330
GCATGTCTGACCCGCAACTTATCAAGGAAA311TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
UCRCS06_0006G09_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006G09, mRNA sequence.
CN192133.1:299-318
GCATGTCTGACCCGCAACTTATCAAGGAAA299TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
UCRPT01_0008K09_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0008K09, mRNA sequence.
CV706642.1:306-325
GCATGTCTGACCCGCAACTTATCAAGGAAA306TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
UCRPT01_0009O23_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0009O23, mRNA sequence.
CV707517.1:301-320
GCATGTCTGACCCGCAACTTATCAAGGAAA301TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
UCRCS07_20G10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-20G10-M20-1-4.g, mRNA sequence.
CX045114.1:301-320
GCATGTCTGACCCGCAACTTATCAAGGAAA301TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
UCRCS07_9E05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-9E05-J9-1-6.g, mRNA sequence.
CX046672.1:298-317
GCATGTCTGACCCGCAACTTATCAAGGAAA298TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
UCRCS09_49G07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-49G07-M14-1-6.g, mRNA sequence.
CX053081.1:141-160
GCATGTCTGACCCGCAACTTATCAAGGAAA141TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
UCRCS09_7A12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-7A12-B24-1-5.b, mRNA sequence.
CX053610.1:298-317
GCATGTCTGACCCGCAACTTATCAAGGAAA298TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
UCRCS08_20A03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-20A03-B6-1-5.g, mRNA sequence.
CX071129.1:301-320
GCATGTCTGACCCGCAACTTATCAAGGAAA301TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
UCRPT02_62E04_b Poncirus trifoliata Roots with Iron Deficiency - UCRPT02-UCR1 Citrus trifoliata cDNA clone UCRPT02-62E04-I7-1-5.b, mRNA sequence.
CX642872.1:185-204
GCATGTCTGACCCGCAACTTATCAAGGAAA185TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
UCRCS10_24H07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-24H07-P14-5.g, mRNA sequence.
CX673798.1:302-321
GCATGTCTGACCCGCAACTTATCAAGGAAA302TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
Citrus unshiu mRNA, clone: FBI1182, 5'-end sequence, expressed in floral bud.
DC889225.1:309-328
GCATGTCTGACCCGCAACTTATCAAGGAAA309TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
UCRCS11_02F05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F05, mRNA sequence.
DN618259.1:317-336
GCATGTCTGACCCGCAACTTATCAAGGAAA317TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA15DC02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY264890.1:313-332
GCATGTCTGACCCGCAACTTATCAAGGAAA313TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA28DD07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY270114.1:320-339
GCATGTCTGACCCGCAACTTATCAAGGAAA320TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA29BG02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY271458.1:312-331
GCATGTCTGACCCGCAACTTATCAAGGAAA312TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA29DC03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY271592.1:312-331
GCATGTCTGACCCGCAACTTATCAAGGAAA312TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA41BB01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY276479.1:319-338
GCATGTCTGACCCGCAACTTATCAAGGAAA319TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA42DB09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY277046.1:362-381
GCATGTCTGACCCGCAACTTATCAAGGAAA362TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA44BE04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY277621.1:296-315
GCATGTCTGACCCGCAACTTATCAAGGAAA296TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA60DH10RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY284294.1:314-333
GCATGTCTGACCCGCAACTTATCAAGGAAA314TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA73BA10RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY289677.1:314-333
GCATGTCTGACCCGCAACTTATCAAGGAAA314TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA82AE04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY293191.1:311-330
GCATGTCTGACCCGCAACTTATCAAGGAAA311TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA86AD11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY294644.1:316-335
GCATGTCTGACCCGCAACTTATCAAGGAAA316TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA86DB12RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY294895.1:311-330
GCATGTCTGACCCGCAACTTATCAAGGAAA311TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
IC0AAA98CA08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY299481.1:314-333
GCATGTCTGACCCGCAACTTATCAAGGAAA314TCAAACAGTCCGTCACCATCCCCGTCATGGCCAATGCTCGTATTGGTCAC
KN0AAQ12YC09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY301094.1:312-331
GCATGTCTGACCCGCAACTTATCAAGGAAA312TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
KN0AAQ2YF05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY302204.1:312-331
GCATGTCTGACCCGCAACTTATCAAGGAAA312TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
KN0AAQ4YC02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY302849.1:314-333
GCATGTCTGACCCGCAACTTATCAAGGAAA314TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
CS00-C1-101-031-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY661272.1:325-344
GCATGTCTGACCCGCAACTTATCAAGGAAA325TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
CS00-C1-101-036-G01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY661763.1:311-330
GCATGTCTGACCCGCAACTTATCAAGGAAA311TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
CS00-C1-101-045-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY662541.1:336-355
GCATGTCTGACCCGCAACTTATCAAGGAAA336TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
CS00-C1-102-088-C11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY672874.1:356-375
GCATGTCTGACCCGCAACTTATCAAGGAAA356TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
CS00-C1-401-008-E05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY675276.1:309-328
GCATGTCTGACCCGCAACTTATCAAGGAAA309TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
CS00-C1-401-010-E09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY675438.1:353-372
GCATGTCTGACCCGCAACTTATCAAGGAAA353TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
CS00-C1-401-011-A05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY675471.1:309-328
GCATGTCTGACCCGCAACTTATCAAAGAAA309TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
CS00-C1-650-016-C07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY680913.1:157-176
GCATGTCTGACCCGCAACTTATCAAGGAAA157TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
CS00-C1-650-026-H08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY681887.1:312-331
GCATGTCTGACCCGCAACTTATCAAGGAAA312TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
CS00-C3-700-060-E07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY697460.1:317-336
GCATGTCTGACCCGCAACTTATCAAGGAAA317TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
CS00-C3-700-090-H07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY700125.1:310-329
GCATGTCTGACCCGCAACTTATCAAGGAAA310TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
CS00-C3-700-096-E09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY700607.1:349-368
GCATGTCTGACCCGCAACTTATCAAGGAAA349TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
CS00-C3-705-007-E11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
EY735906.1:268-287
GCATGTCTGACCCGCAACTTATCAAGGAAA268TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
CS00-C5-003-013-B10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY745490.1:290-309
GCATGTCTGACCCGCAACTTATCAAGGAAA290TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGCCAC
CR05-C1-100-079-A07-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY764331.1:362-381
GCATGTCTGACCCGCAACTTATCAAGGAAA362TCAAACAGTCCGTCACCATCCCCGTCATGGCCAAGGCTCGTATTGGTCAC
Ophion ventricosus genome assembly, chromosome: 13.
OZ010723.1:5337815-5337834
CCCGAAATTCCTTAATTACCAACCCTTACC5337815TCAAACAGTCCGTCACCATCGTGCCTGAGAAATATGACACTCTACCTTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GATGGTGACGGACTGTTTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GATGGTGACGGACTGTTTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.222 | 0.214 | search_plus_done; http://172.18.8.135:50400/match?q=GATGGTGACGGACTGTTTGA&k=0&no_gap=0&offset=0&limit=50
5.185 | 4.963 | search_minus_done; http://172.18.8.135:50400/match?q=TCAAACAGTCCGTCACCATC&k=0&no_gap=0&offset=0&limit=48
5.219 | 0.034 | cgi_end;

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