GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 14:28:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Anas platyrhynchos genome assembly, chromosome: 1.
LS423611.1:149430347-149430367
GTCAATATGTCCTTTCTTAGAAAGGAAGGA149430347GATGTGAGAGATGGGTGTTGATGAGAAGTCCATAGCCAGTACATTTCCTCT
Sciurus carolinensis genome assembly, chromosome: 6.
LR738595.1:38226491-38226511
CCATCTGCCCCCTTTCTTTTCATGTTCCTA38226491TCAACACCCATCTCTCACATCTGAAGACTTGGGTCTTCAGTCTTATGCACC
Mobula hypostoma genome assembly, chromosome: 4.
OY992595.1:15237660-15237680
CTACAGAGAAAAGCCATCAAATCCTAAAGA15237660TCAACACCCATCTCTCACATCATTGGTTTGTTCATACACTCAGTGACAACT
Anas acuta genome assembly, chromosome: 1.
OZ009962.1:52178308-52178328
AGGGGAAATGTACTGGCTATGGACTTCTCA52178308TCAACACCCATCTCTCACATCTCCTTCCTTTCTAAGAAAGGACATATTGAC
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:7677556-7677576
CATATCTTAAGCATTGAAATTCAATTACCA7677556TCAACACCCATCTCTCACATCAAGCTTTTACATATTTGATGACAATCTAAA
Sambucus nigra genome assembly, chromosome: 1.
OX422207.1:77890975-77890995
CCCCGTTATCCCCAGATAGACCTAATACAC77890975TCAACACCCATCTCTCACATCTTAGTTTCCTGTAAACACAATTCTCCCTTA
Cerastoderma edule genome assembly, chromosome: 11.
OX401414.1:21557826-21557846
TTTGCCAGGACAAACAATGAATTAGCGATG21557826TCAACACCCATCTCTCACATCTTGGCTTTATAAATGATAAATGAATTATTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GATGTGAGAGATGGGTGTTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GATGTGAGAGATGGGTGTTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.140 | 0.131 | search_plus_done; http://172.18.8.135:50400/match?q=GATGTGAGAGATGGGTGTTGA&k=0&no_gap=0&offset=0&limit=50
0.396 | 0.256 | search_minus_done; http://172.18.8.135:50400/match?q=TCAACACCCATCTCTCACATC&k=0&no_gap=0&offset=0&limit=49
0.400 | 0.004 | cgi_end;

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