GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-13 04:27:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus cDNA, clone: LjFL1-039-DH10, 5' end, protoplasts prepared from suspension-cultured cells.
BW610307.1:132-151
GTGATGTGTGTTCTTCACTCCTGTAATGCG132CTACTGCGTGTTCGTTAATCACACCCCAATACCCTAACTACCCCCTCTGT
Lotus japonicus cDNA, clone: LjFL1-048-CC03, 5' end, protoplasts prepared from suspension-cultured cells.
BW612331.1:131-150
GTGATGTGTGTTCTTCACTCCTGTAATGCG131CTACTGCGTGTTCGTTAATCACACCCCAATACCCTAACTACCCCCTCTGT
Lotus japonicus cDNA, clone: LjFL1-050-BH05, 5' end, protoplasts prepared from suspension-cultured cells.
BW612792.1:129-148
GTGATGTGTGTTCTTCACTCCTGTAATGCG129CTACTGCGTGTTCGTTAATCACACCCCAATACCCTAACTACCCCCTCTGT
Lotus japonicus cDNA, clone: LjFL1-054-AB06, 5' end, protoplasts prepared from suspension-cultured cells.
BW613691.1:144-163
GTGATGTGTGTTCTTCACTCCTGTAATGCG144CTACTGCGTGTTCGTTAATCACACCCCAATACCCTAACTACCCCCTCTGT
Lotus japonicus cDNA, clone: LjFL1-058-CG01, 5' end, protoplasts prepared from suspension-cultured cells.
BW614821.1:138-157
GTGATGTGTGTTCTTCACTCCTGTAATGCG138CTACTGCGTGTTCGTTAATCACACCCCAATACCCTAACTACCCCCTCTGT
Lotus japonicus cDNA, clone: LjFL1-sab-002-CF03, 5' end, protoplasts prepared from suspension-cultured cells.
BW620627.1:132-151
GTGATGTGTGTTCTTCACTCCTGTAATGCG132CTACTGCGTGTTCGTTAATCACACCCCAATACCCTAACTACCCCCTCTGT
Lotus japonicus cDNA, clone: LjFL1-048-CC03, HTC.
AK337189.1:140-159
GTGATGTGTGTTCTTCACTCCTGTAATGCG140CTACTGCGTGTTCGTTAATCACACCCCAATACCCTAACTACCCCCTCTGT
Lotus japonicus genomic DNA, chromosome 6, clone: LjT05E07, TM0055.
AP004526.1:53492-53511
ATGATGTGTGTTCTTCACTCCTGTAATGCG53492CTACTGCGTGTTCGTTAATCACACCCCAATACCCTAACTACCCCCTCTGT
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:66120461-66120480
GTGATGTGTGTTCTTCACTCCTGTAATGCG66120461CTACTGCGTGTTCGTTAATCACACCCCAATACCCTAACTACCCCCTCTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GATTAACGAACACGCAGTAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GATTAACGAACACGCAGTAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=GATTAACGAACACGCAGTAG&k=0&no_gap=0&offset=0&limit=50
0.227 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=CTACTGCGTGTTCGTTAATC&k=0&no_gap=0&offset=0&limit=50
0.233 | 0.006 | cgi_end;

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