GGGenome | Results

2025-04-08 21:00:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:8557209-8557236

ACAAAATCTGATGCAATAATAGTAAACTGA8557209GATTCATCCTCGACGAAAGAGGATTCACTGCTACTGCTGCTAACTGAGACTGAACCGC

KR 1020160012808-A/9: Nucleic acid molecules and primer sets related to restoration of male sterility in pepper and uses thereof.
LG142596.1:71410-71437

GCAGTTCAGTCTCAGTTAGCAGCAGTAGCA71410GTGAATCCTCTTTCGTCGAGGATGAATCTCAGTTTACTATTATTGCATCAGATTTTGT

Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:246577286-246577313

GCAGTTCAGTCTCAGTTAGCAGCAGTAGCA246577286GTGAATCCTCTTTCGTCGAGGATGAATCTCAGTTTACTATTATTGCATCAGATTTTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.105 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=GATTCATCCTCGACGAAAGAGGATTCAC&k=0&no_gap=0&offset=0&limit=50
0.176 | 0.071 | search_minus_done; http://172.18.8.135:50400/match?q=GTGAATCCTCTTTCGTCGAGGATGAATC&k=0&no_gap=0&offset=0&limit=49
0.177 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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