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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-20 06:04:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

T113367e KV2 Medicago truncatula cDNA clone pKV2-2A1, mRNA sequence.
AW191200.1:260-285
ACCAATCATTATTGAAGAATCCAGGATTTT260GATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATCTTGTTTGGACACACTTG
M111088e DSIR Medicago truncatula cDNA clone IR170, mRNA sequence.
AW208055.2:256-281
ACCAATCATTATTGAAGAATCCAGGATTTT256GATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATCTTGTTTGGACACACTTG
N210536e MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone MHAM-2I16, mRNA sequence.
AW584486.1:214-239
ACCAATCATTATTGAAGAATCCAGGATTTT214GATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATCTTGTTTGGACACACTTG
EST484813 GVN Medicago truncatula cDNA clone pGVN-71F3 5' end, mRNA sequence.
BG583063.1:197-222
ACCAATCATTATTGAAGAATCCAGGATTTT197GATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATCTTGTTTGGACACACTTG
NF029E09PH1F1070 Phoma-infected Medicago truncatula cDNA clone NF029E09PH 5', mRNA sequence.
BQ140150.1:167-192
ACCAATCATTATTGAAGAATCCAGGATTTT167GATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATCTTGTTTGGACACACTTG
EST649345 KV3 Medicago truncatula cDNA clone KV3-54G3, mRNA sequence.
CB892376.1:263-288
ACCAATCATTATTGAAGAATCCAGGATTTT263GATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATCTTGTTTGGACACACTTG
EST670449 MTUS Medicago truncatula cDNA clone MTUS-23F5, mRNA sequence.
CF069728.1:182-207
ACCAATCATTATTGAAGAATCCAGGATTTT182GATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATCTTGTTTGGACACACTTG
s13dNF34D09AT078_510350 Aphid-Infected Shoots Medicago truncatula cDNA, mRNA sequence.
CX526303.1:252-277
ACCAATCATTATTGAAGAATCCAGGATTTT252GATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATCTTGTTTGGACACACTTG
Medicago truncatula chromosome 6 clone mth2-14d9, WORKING DRAFT SEQUENCE, 4 ordered pieces.
AC148240.52:50018-50043
ACCAATCATTATTGAAGAATCCAGGATTTT50018GATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATCTTGTTTGGACACACTTG
Medicago truncatula clone mth2-144h15, WORKING DRAFT SEQUENCE, 51 unordered pieces.
AC225523.11:91611-91636
ACCAATCATTATTGAAGAATCCAGGATTTT91611GATTCCCATATTTTCTGCCAACTATGCATCTTCTTCATCTTGTTTGGACACACTTG
Medicago truncatula chromosome 6 clone mth2-14d9, WORKING DRAFT SEQUENCE, 4 ordered pieces.
AC148240.52:23855-23880
CAAGTGTGTCCAAACAAGATGAAGAAGATG23855CATAGTTGGCAGAAAATATGGGAATCAAAATCCTGGATTCTTCAATAATGATTGGT
Medicago truncatula chromosome 6 clone mth2-40d11, WORKING DRAFT SEQUENCE, 3 ordered pieces.
AC149212.53:76498-76523
CAAGTGTGTCCAAACAAGATGAAGAAGATG76498CATAGTTGGCAGAAAATATGGGAATCAAAATCCTGGATTCTTCAATAATGATTGGT
Medicago truncatula clone mth2-152p10, WORKING DRAFT SEQUENCE, 3 ordered pieces.
AC225450.11:8876-8901
CAAGTGTGTCCAAACAAGATGAAGAAGATG8876CATAGTTGGCAGAAAATATGGGAATCAAAATCCTGGATTCTTCAATAATGATTGGT
Medicago truncatula clone mth2-144h15, WORKING DRAFT SEQUENCE, 51 unordered pieces.
AC225523.11:19752-19777
CAAGTGTGTCCAAACAAGATGAAGAAGATG19752CATAGTTGGCAGAAAATATGGGAATCAAAATCCTGGATTCTTCAATAATGATTGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GATTCCCATATTTTCTGCCAACTATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GATTCCCATATTTTCTGCCAACTATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.417 | 0.408 | search_plus_done; http://172.18.8.135:50400/match?q=GATTCCCATATTTTCTGCCAACTATG&k=0&no_gap=0&offset=0&limit=50
0.530 | 0.113 | search_minus_done; http://172.18.8.135:50400/match?q=CATAGTTGGCAGAAAATATGGGAATC&k=0&no_gap=0&offset=0&limit=40
0.532 | 0.003 | cgi_end;

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