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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:34:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

JP 2007523636-A/228: CELL CYCLE GENES AND RELATED METHODS OF USING.
DJ335438.1:1008-1027
GGGTTGAATAATTCTGTTGTACAGTTATGG1008GATTCGCAATCTAATAAAAAGCTAAGAGCCTTGAAAGGTCATCATGACCG
Sequence 228 from patent US 7598084.
GP700749.1:1008-1027
GGGTTGAATAATTCTGTTGTACAGTTATGG1008GATTCGCAATCTAATAAAAAGCTAAGAGCCTTGAAAGGTCATCATGACCG
JP 2011097941-A/228: CELL CYCLE GENES AND RELATED METHODS OF USING.
HV339307.1:1008-1027
GGGTTGAATAATTCTGTTGTACAGTTATGG1008GATTCGCAATCTAATAAAAAGCTAAGAGCCTTGAAAGGTCATCATGACCG
TSA: Ictalurus punctatus vet_k53:86308 mRNA sequence.
JT162730.1:216-235
ATCAAGTCTGGGTCTACAATGCATTTGTAT216GATTCGCAATCTAATAAAAAGACCAGTGCTGGTGCCTGACGTAAACTATT
TSA: Ictalurus punctatus aby_k61:874409 mRNA sequence.
JT481324.1:2006-2025
ATCAAGTCTGGGTCTACAATGCATTTGTAT2006GATTCGCAATCTAATAAAAAGACCAGTGCTGGTGCCTGACGTAAACTATT
Limnoperna fortunei genome assembly, chromosome: 13.
OX104123.1:22494928-22494947
TTATTTTTTACTTTGTACATATTTCTTATG22494928GATTCGCAATCTAATAAAAATACGTCTATAATTAGCTCCCCCTTTTTGTA
Diogma glabrata genome assembly, chromosome: 2.
OY856187.1:241818694-241818713
TAATTTTAAATTAAATTATATTATCACAAA241818694GATTCGCAATCTAATAAAAATCACAGACGTTTAGTTTTAACAAAGTATAA
Nymphalis urticae genome assembly, chromosome: 3.
LR989985.1:3429109-3429128
TATTTTTAATTGATTTCATTGATTGGACAT3429109TTTTTATTAGATTGCGAATCAACGAAAAAAAAAACAAAAAATACACATAT
Sialis fuliginosa genome assembly, chromosome: 6.
OY540814.1:21777027-21777046
AGGACATAGGCTACTTTGTATTCCAATTTT21777027TTTTTATTAGATTGCGAATCTAAAAACTTGTTTTATCATCATAATAGAAA
Germaria angustata genome assembly, chromosome: 3.
OY813000.1:51921855-51921874
GCGGCTTGGATTTTTTTCAAGGAAAATTAA51921855TTTTTATTAGATTGCGAATCCTGAAGGGGGTACAAACTTTTCGATAAATA
Argyra leucocephala genome assembly, chromosome: 1.
OZ012677.1:103167357-103167376
AAATATTATAAGATCCCATTGTATATACTT103167357TTTTTATTAGATTGCGAATCAGACATTATGTGACAGTGAGTTATTATGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GATTCGCAATCTAATAAAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GATTCGCAATCTAATAAAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.257 | 0.248 | search_plus_done; http://172.18.8.135:50400/match?q=GATTCGCAATCTAATAAAAA&k=0&no_gap=0&offset=0&limit=50
0.362 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=TTTTTATTAGATTGCGAATC&k=0&no_gap=0&offset=0&limit=43
0.364 | 0.003 | cgi_end;

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