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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 15:37:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mobula hypostoma genome assembly, chromosome: 16.
OY992608.1:44348134-44348154
GGAGAAGGAATCTGATAGGAGAGGAGAGTG44348134GATTCTGGGAGAAGGTGAAGGACGAGGGACCCAGGGGAAGGTGATAGACAG
Trifolium pratense DNA, clone:RCG02589.
DE214175.1:29-49
AGTGCCCTGAGAAATCTTTAAGAGTTTT29GATTCTGGGAGAAGGTGAAGGTATGAATGAGGAAGGAGAAATTATTTCTTT
Trifolium pratense DNA, clone:RCG01025.
DE246681.1:29-49
AGTGCCCTGAGAAATCTCTAAGAGTTCT29GATTCTGGGAGAAGGTGAAGGTATGAATGAGGAAGGAGAAATTATTTCTTT
Homo sapiens PAC clone RP5-1200I23 from 7, complete sequence.
AC004996.1:68815-68835
TTCTCACTGCCATATAAATCTGAGGCCTGT68815CCTTCACCTTCTCCCAGAATCAAAGGAGATTTGTGTGTGTGTGTGTCCCAT
Homo sapiens isolate CHM13 chromosome 7.
CP068271.2:27460947-27460967
TTCTCACTGCCATATAAATCTGAGGCCTGT27460947CCTTCACCTTCTCCCAGAATCAAAGGAGATTTGTGTGTGTGTGTGTCCCAT
Pan troglodytes BAC clone RP43-1E11 from chromosome 7, complete sequence.
AC146167.2:62934-62954
TTCTCACTGCCATATAAATCTGAGGCCTGT62934CCTTCACCTTCTCCCAGAATCAAAGGAGATTTGTGTGTGTGCGTCCCATTC
Pan troglodytes BAC clone CH251-513D12 from chromosome unknown, complete sequence.
AC157527.2:104277-104297
TTCTCACTGCCATATAAATCTGAGGCCTGT104277CCTTCACCTTCTCCCAGAATCAAAGGAGATTTGTGTGTGTGCGTCCCATTC
Eukaryotic synthetic construct chromosome 7.
CP034506.1:27354219-27354239
TTCTCACTGCCATATAAATCTGAGGCCTGT27354219CCTTCACCTTCTCCCAGAATCAAAGGAGATTTGTGTGTGTGTGTGTCCCAT
Eukaryotic synthetic construct chromosome 7.
CP034531.1:27354219-27354239
TTCTCACTGCCATATAAATCTGAGGCCTGT27354219CCTTCACCTTCTCCCAGAATCAAAGGAGATTTGTGTGTGTGTGTGTCCCAT
Trifolium pratense DNA, clone:RCG02938.
DE214452.1:195-215
AAAGAAATAATTTCTCCTTCCTCATTCATA195CCTTCACCTTCTCCCAGAATCAAAACTCTTAGAGATTTCTCAGGGCACT
Papio anubis clone RP41-453I15, WORKING DRAFT SEQUENCE, 8 ordered pieces.
AC152024.2:60201-60221
TTCTCACTGCTGTATCAATCTGAGGTCTGT60201CCTTCACCTTCTCCCAGAATCAAAGGAGATTTTTGTGTGTGTGTGTCCCAT
Nomascus leucogenys clone CH271-83P5, WORKING DRAFT SEQUENCE, 8 ordered pieces.
AC206080.2:152038-152058
TTCTCATGGCCATATAAACCTGAGGCCTGT152038CCTTCACCTTCTCCCAGAATCAAAGGAGATTTTTGTGTGTGTGTCCCATTC
Chlorocebus aethiops clone CH252-143K6, WORKING DRAFT SEQUENCE, 4 ordered pieces.
AC212528.2:31762-31782
TTCTCACTGCCGTATCAATCTGAGGCCTGT31762CCTTCACCTTCTCCCAGAATCAAAGGAGATTTTTGTGTGTGTGTGTCCCAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GATTCTGGGAGAAGGTGAAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GATTCTGGGAGAAGGTGAAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.385 | 0.376 | search_plus_done; http://172.18.8.135:50400/match?q=GATTCTGGGAGAAGGTGAAGG&k=0&no_gap=0&offset=0&limit=50
0.524 | 0.140 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTCACCTTCTCCCAGAATC&k=0&no_gap=0&offset=0&limit=47
0.531 | 0.006 | cgi_end;

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