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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:29:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Heterocephalus glaber genome assembly, chromosome: 17.
OZ001125.1:57421424-57421442
TTGGACCTCCTCAGCCTCCTGAGTAGCTGA57421424GATTTCAGGGCTTTGTCACCAGGCCGGGCTAGCACTATGGTTCTGAGAA
KS24028B06 KS24 Capsicum annuum cDNA, mRNA sequence.
GD120465.1:69-87
TGTTTTGAAGAAACCAAATGTTTGCTTGAT69GATTTCAGGGCTTTGTCACCGCAGTAAGTCAAATGCGCTCATTTGTTCC
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:239979819-239979837
TGTTTTGAAGAAACCAAATGTTTGCTTGAT239979819GATTTCAGGGCTTTGTCACCGCAGTAAGTCAAATGCGCTCATTTGTTCC
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 10.
CP124710.1:127488245-127488263
TGTTTTGAAGAAACCAAATGTTTATTTGAT127488245GATTTCAGGGCTTTGTCACAGCAGTAAGTCATATGCGCTCATTTGTTCC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:244484933-244484951
TGTTTTGAAGAAACCAAATGTTTGCTTGAT244484933GATTTCAGGGCTTTGTCACCGCAGTAAGTCAAATGCGCTCATTTGTTCC
Mystacides longicornis genome assembly, chromosome: 1.
OY756420.1:2401279-2401297
TATGAAGAACTGTTGTGTAGCTGACTAAAA2401279GATTTCAGGGCTTTGTCACAGTCTGCTATGCATCCACTTTTGGAACGCT
Heterocephalus glaber genome assembly, chromosome: 21.
OX090929.1:57181419-57181437
TTCTCAGAACCATAGTGCTAGCCCGGCCTG57181419GTGACAAAGCCCTGAAATCTCAGCTACTCAGGAGGCTGAGGAGGTCCAA
Heterocephalus glaber genome assembly, chromosome: 17.
OZ001082.1:57661547-57661565
TTCTCAGAACCATAGTGCTAGCCCGGCCTG57661547GTGACAAAGCCCTGAAATCTCAGCTACTCAGGAGGCTGAGGAGGTCCAA
TSA: Capsicum annuum MGMT_Contig17767, mRNA sequence.
JW068011.1:28-46
ACAAATGAGCGCATTTGACTTACTGCG28GTGACAAAGCCCTGAAATCATCAAGCAAACATTTGGTTTCTTCAAAACA
Oryza glaberrima DNA, clone: W0001-9-B09-67E09R1, left end.
FT800669.1:103-121
TTCTCGGATAATCGATAAGGCGCAAAGTCT103GTGACAAAGCCCTGAAATCTAACTTGACTGTTCTGATGTCTGACTTTCC
Oryza sativa indica subgroup Inn Ma Yebaw DNA, chromosome: 7.
AP027391.1:10073294-10073312
TTCTCGGATAATCGAGAAGCTACAGAATCT10073294GTGACAAAGCCCTGAAATCTGACTTGGCTGTTCTGATATCTGACTATCC
Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
CP012615.1:9387404-9387422
TTCTCGGATAATCGAGAAGCTACAGAATCT9387404GTGACAAAGCCCTGAAATCTGACTTGGCTGTTCTGATATCTGACTATCC
Oryza sativa Indica Group cultivar Shuhui498 chromosome 7, partial sequence.
CP018163.1:10212674-10212692
TTCTCGGATAATCGAGAAGCTACAGAATCT10212674GTGACAAAGCCCTGAAATCTGACTTGGCTGTTCTGATATCTGACTATCC
Oryza sativa Indica Group cultivar Minghui 63 chromosome 7.
CP054682.1:10200817-10200835
TTCTCGGATAATCGAGAAGCTACAGAATCT10200817GTGACAAAGCCCTGAAATCTGACTTGGCTGTTCTGATATCTGACTATCC
Oryza sativa Indica Group cultivar Zhenshan 97 chromosome 7.
CP056058.1:10506650-10506668
TTCTCGGATAATCGAGAAGCTACAGAATCT10506650GTGACAAAGCCCTGAAATCTGACTTGGCTGTTCTGATATCTGACTATCC
Oryza sativa indica subgroup cultivar ZH8015 chromosome 07.
CP141114.1:10294541-10294559
TTCTCGGATAATCGAGAAGCTACAGAATCT10294541GTGACAAAGCCCTGAAATCTGACTTGGCTGTTCTGATATCTGACTATCC
Impatiens glandulifera genome assembly, chromosome: 1.
OU015481.1:124422619-124422637
AAACACGTAAAACTGAAGTAGAGAAAAGTA124422619GTGACAAAGCCCTGAAATCTTGAAGAAGAATACCTTTTATCATATTAGT
Oryza sativa genome assembly, chromosome: 10.
OX637255.1:1407512-1407530
TTCTCGGATAATCGATAAGGCGCAAAGTCT1407512GTGACAAAGCCCTGAAATCTGACTTGACTGTTCTGATGTCTGACTTTCC
Anorthoa munda genome assembly, chromosome: 24.
OX243917.1:12408762-12408780
TCAAGCGTAAACCGATGTTAGCATCACCAT12408762GTGACAAAGCCCTGAAATCACACCACTTTCACAGACACTACAACATAAC
Agrochola lychnidis genome assembly, chromosome: 6.
OY796853.1:3171274-3171292
TCAAATGACAATCAATGATGGCATCACCCC3171274GTGACAAAGCCCTGAAATCACACCACTTTCAAAGGCACTACAACATAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GATTTCAGGGCTTTGTCAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GATTTCAGGGCTTTGTCAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.254 | 0.245 | search_plus_done; http://172.18.8.135:50400/match?q=GATTTCAGGGCTTTGTCAC&k=0&no_gap=0&offset=0&limit=50
0.421 | 0.167 | search_minus_done; http://172.18.8.135:50400/match?q=GTGACAAAGCCCTGAAATC&k=0&no_gap=0&offset=0&limit=44
0.430 | 0.009 | cgi_end;

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