GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 12:02:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Geotrypetes seraphini genome assembly, chromosome: 4.
LR699149.1:204055469-204055488
AGAGGGGAGAAGCTGGACACAGGGAGATAT204055469GCAAAAGAGAGGAGATGGTGGGCATGGATGGAAGCATAGAAGAGGGACAA
Euclidia mi genome assembly, chromosome: 28.
OX123209.2:16761667-16761686
GAGCCACCCTGTATTGCACAGCAAAGTTTT16761667GCAAAAGAGAGGAGATGGTGCTGAGTGTGATACCTTGGCGACAGTTCCTG
Meandrina meandrites genome assembly, chromosome: 2.
OY855904.1:28091190-28091209
CATGCTGTTAAATGCAGTTGAACTAACTAA28091190GCAAAAGAGAGGAGATGGTGCTTGTCTGGCAGGCAGCAGAATGTGAATGT
Sepia lycidas genome assembly, chromosome: 38.
OZ010608.1:69692757-69692776
CATTATATTTATTGTAATGGATAGTTACAA69692757GCAAAAGAGAGGAGATGGTGTATGCTTATTTTTATTACCATGTTCTCTCC
Caprimulgus europaeus genome assembly, chromosome: 4.
OU015526.1:55618882-55618901
AACTCAAATGGGGCTTCTACTTCACACCAT55618882CACCATCTCCTCTCTTTTGCTGCTGTTTCAGTCCTCCACCTCCAACTGTG
TSA: Cannabis sativa PK24469.1_1.CasaPuKu mRNA sequence.
JP449528.1:613-632
TCCTTACATAATAAACTCCCTAGTACTTCT613CACCATCTCCTCTCTTTTGCTAGTTTTCGAACCCGAATCACAAGACTCTT
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:126733569-126733588
TTCTGCTTCCTCTCTTTTGTCAGAGCTGCT126733569CACCATCTCCTCTCTTTTGCCAAAAATCTGTAATATAGTGAACTTTTTGG
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:127503672-127503691
TTCTGCTTCCTCTCTTTTGTCAGAGCTGCT127503672CACCATCTCCTCTCTTTTGCCAAAAATCTGTAATATAGTGAACTTTTTGG
Barbarea vulgaris genome assembly, chromosome: 8.
OY763894.1:3806911-3806930
TGTATTGGCTCCCTGGAACTGGATTAATAG3806911CACCATCTCCTCTCTTTTGCTTCTTACTGTTTCTTGGCATTTAAGTTAGG
Pherbina coryleti genome assembly, chromosome: 3.
OX030950.1:124747000-124747019
TCCACCTCCCCCTCCCCCTCTCCACAACTT124747000CACCATCTCCTCTCTTTTGCACAAAAACTCTTCGTGTTGTTCATTTTTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCAAAAGAGAGGAGATGGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAAAAGAGAGGAGATGGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.111 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=GCAAAAGAGAGGAGATGGTG&k=0&no_gap=0&offset=0&limit=50
0.158 | 0.047 | search_minus_done; http://172.18.8.135:50400/match?q=CACCATCTCCTCTCTTTTGC&k=0&no_gap=0&offset=0&limit=46
0.162 | 0.004 | cgi_end;

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