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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-07 09:11:33, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB005J17, complete sequence.
AC189200.2:27220-27239
TCTTTAGCCAGTGTACTATTTGCTGTTTTC27220GCAAAATGATGCCCCATAAAGAGGGTTATATATATATATATATATATATA
Camellia sinensis genome assembly, chromosome: 1.
OZ007459.1:226658232-226658251
CATTATAATGAGGTATCAAAATGATAGGGT226658232GCAAAATGATGCCCCATAAAATAATCTATTACAATTTAAAATGATGCCCT
Hedya salicella genome assembly, chromosome: 7.
FR990103.1:18087362-18087381
CACTTGAATACTTTCCATGTCGGTTCTGGA18087362GCAAAATGATGCCCCATAAAAGTTTAGTATTACAGCCCAGGGGCCCGTTT
Brassica napus genome assembly, chromosome: A02.
HG994356.1:9884156-9884175
AGATGATCATACTTTATATATATAACCCTA9884156TTTATGGGGCATCATTTTGCGAAAACAGCATATAGTACACTGGCTAAAGA
Brassica rapa subsp. trilocularis genome assembly, chromosome: 2.
OZ282416.1:9777977-9777996
ATGATCATACTTTATATATATATAACCCTA9777977TTTATGGGGCATCATTTTGCGAAAACAGCATATAGTACACTGGCTAAAGA
Brassica rapa subsp. narinosa genome assembly, chromosome: 2.
OZ282443.1:10033553-10033572
ATGATCATACTTTATATATATATAACCCTA10033553TTTATGGGGCATCATTTTGCGAAAACAGCATATAGTACACTGGCTAAAGA
Erebia stirius genome assembly, chromosome: 7.
OZ182014.1:15576305-15576324
GCTTAAAGGTGCATCCACCCGAACTTACTC15576305TTTATGGGGCATCATTTTGCAACACCACTACTACAGTCCATTAATGTTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAAAATGATGCCCCATAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAAAATGATGCCCCATAAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.724 | 0.715 | search_plus_done; http://172.18.8.135:50900/match?q=GCAAAATGATGCCCCATAAA&k=0&no_gap=0&offset=0&limit=50
1.612 | 0.889 | search_minus_done; http://172.18.8.135:50900/match?q=TTTATGGGGCATCATTTTGC&k=0&no_gap=0&offset=0&limit=47
1.615 | 0.003 | cgi_end;

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