GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:02:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

LCUSE1NG_T3_037_G05_14JUN2007_035 LCUSE1NG Lens culinaris cDNA, mRNA sequence.
GT621955.1:417-439
AGAAATGCAGTTATGGGGCTGTAGAAGTTA417GCAAACCTGCTAAAGAACTTGAGAGTATTTACTCTGAATACTTGAAGTTGAAA
TSA: Lens culinaris contig03090.Lecu mRNA sequence.
JI849361.1:338-360
AGAAATGCAGTTATGGGGCTGTAGAAGTTA338GCAAACCTGCTAAAGAACTTGAGAGTATTTACTCTGAATACTTGAAGTTGAAA
Medicago truncatula strain A17 clone mte1-27e16, *** SEQUENCING IN PROGRESS ***, 14 unordered pieces.
AC157501.3:119571-119593
AGAAGTGCAGTTATGGTGCTGTAGAAGTTA119571GCAAACCTGCTAAAGAACTTGAGGTAGGTATCGCTTCCATTTATAATCAACAC
Medicago truncatula clone mth2-14c17, complete sequence.
AC137823.45:3163-3185
AGAAGTGCAGTTATGGTGCTGTAGAAGTTA3163GCAAACCTGCTAAAGAACTTGAGGTAGGTATCGCTTCCATTTATAATCAACAC
Medicago truncatula clone mth2-14j5, complete sequence.
AC146650.13:27419-27441
AGAAGTGCAGTTATGGTGCTGTAGAAGTTA27419GCAAACCTGCTAAAGAACTTGAGGTAGGTATCGCTTCCATTTATAATCAACAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCAAACCTGCTAAAGAACTTGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAAACCTGCTAAAGAACTTGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.364 | 0.355 | search_plus_done; http://172.18.8.135:50400/match?q=GCAAACCTGCTAAAGAACTTGAG&k=0&no_gap=0&offset=0&limit=50
0.415 | 0.051 | search_minus_done; http://172.18.8.135:50400/match?q=CTCAAGTTCTTTAGCAGGTTTGC&k=0&no_gap=0&offset=0&limit=45
0.415 | 0.000 | cgi_end;

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