GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-19 07:21:49, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo isolate PI 511890 chromosome 1.
CP136102.1:2501901-2501920
AGTGTCCTTTTCACTTTTTTGGTCAAAACA2501901GCAAACGCAATTAAAACACGATTATTCATTTAATATTATTATTAATAACT
Cucumis melo genomic scaffold, anchoredscaffold00060.
LN681804.1:89462-89481
AGTGTCCTTTTCACTTTTTTGGTCAAAACA89462GCAAACGCAATTAAAACACGATTATTCATTTAATATTATTATTAATAACT
Bombyx mori Nichi01 DNA, chromosome 3, complete sequence.
AP026184.1:8073699-8073718
AAAATATTCGAATATGGTTTTTTTCAGTCC8073699GCAAACGCAATTAAAACACGTATGTCGTTTAATCACGCGCTTATTATTTT
Lepidonotus clava genome assembly, chromosome: 8.
OW387140.1:26745859-26745878
TAAAGTGCGCCAGGAAATCGTGTATGAGCC26745859GCAAACGCAATTAAAACACGTTGATAGATTCCCCCTTCTGTCTCGGCCCT
Argiope bruennichi genome assembly, chromosome: 1.
OX387439.1:50214676-50214695
AGAAAATGATTTTTTATAGTAAAGACTATG50214676GCAAACGCAATTAAAACACGTTTTCTAAAACAAGTTAATTCCTTATTATG
Cucumis melo genomic chromosome, chr_1.
LN713255.1:33549688-33549707
AGTTATTAATAATAATATTAAATGAATAAT33549688CGTGTTTTAATTGCGTTTGCTGTTTTGACCAAAAAAGTGAAAAGGACACT
Lumbricus rubellus genome assembly, chromosome: 7.
OX243817.1:18998953-18998972
CAATCCTAACCCCAGTAACCCTCAGCCATT18998953CGTGTTTTAATTGCGTTTGCGATAACCTTAGCTTAGATGGGCTTGGCTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCAAACGCAATTAAAACACG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAAACGCAATTAAAACACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.147 | 0.138 | search_plus_done; http://172.18.8.135:50800/match?q=GCAAACGCAATTAAAACACG&k=0&no_gap=0&offset=0&limit=50
0.214 | 0.067 | search_minus_done; http://172.18.8.135:50800/match?q=CGTGTTTTAATTGCGTTTGC&k=0&no_gap=0&offset=0&limit=45
0.215 | 0.002 | cgi_end;

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