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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 09:06:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 110 from Patent WO2012088289.
JA817773.1:335-354
TGACAACTCCATGATCCTGCAGGAGACGAT335GCAAAGATCGGCGAAGAAGACGAGTCATCTCCATCGTCTTGCTCTTCACC
Sequence 110 from patent US 9702013.
KH919300.1:335-354
TGACAACTCCATGATCCTGCAGGAGACGAT335GCAAAGATCGGCGAAGAAGACGAGTCATCTCCATCGTCTTGCTCTTCACC
Sequence 110 from patent US 10590490.
MO959577.1:335-354
TGACAACTCCATGATCCTGCAGGAGACGAT335GCAAAGATCGGCGAAGAAGACGAGTCATCTCCATCGTCTTGCTCTTCACC
BOMRI33TF BO_2_3_KB Brassica oleracea genomic clone BOMRI33, genomic survey sequence.
BZ517948.1:608-627
TGACAACTCCATGATCCTGCAGGAGACGAT608GCAAAGATCGGCGAAGAAGACGAGTCATCTCCATCGTCTTGCTCTTCACC
Brassica rapa subsp. pekinensis clone KBrH035H17, complete sequence.
CU695296.1:72163-72182
TGACAACTCCATGATCCTGCAGGAGACGAT72163GCAAAGATCGGCGAAGAAGACGAGTCATCTCCATCGTCTTGCTCTTCACC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB053L06, complete sequence.
AC189390.2:53878-53897
TGACAACTCCATGATCCTGCAGGAGACGAT53878GCAAAGATCGGCGAAGAAGACGAGTCATCTCCATCGTCTTGCTCTTCACC
Brassica napus cultivar Xiang5A chromosome 7.
CP123882.1:13637594-13637613
TGACAACTCCATGATCCTGCAGGAGACGAT13637594GCAAAGATCGGCGAAGAAGACGAGTCATCTCCATCGTCTTGCTCTTCACC
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:32724607-32724626
TGACAACTCCATGATCCTGCAGGAGACGAT32724607GCAAAGATCGGCGAAGAAGACGAGTCATCTCCATCGTCTTGCTCTTCACC
zfi01-10ms1-a08 Zfi01 Zamia fischeri cDNA clone zfi01-10ms1-a08 5', mRNA sequence.
CV009144.1:269-288
GGTGAAGAGCAAGACGATGGAGATGACTCG269TCTTCTTCGCCGATCTTTGCATCGTCTCCTGCAGGATCATGGAGTTGTCA
Brassica oleracea var. viridis mRNA, clone: KALE-063H17, 3' end sequence.
DK539412.1:206-225
GGTGAAGAGCAAGACGATGGAGATGACTCG206TCTTCTTCGCCGATCTTTGCATCGTCTCCTGCAGGATCATGGAGTTGTCA
Brassica oleracea var. viridis mRNA, clone: KALE-109O10, 3' end sequence.
DK557157.1:262-281
GGTGAAGAGCAAGACGATGGAGATGACTCG262TCTTCTTCGCCGATCTTTGCATCGTCTCCTGCAGGATCATGGAGTTGTCA
JKBNM5_T7_009_C08_30JUN2004_060 JKBNM5 Brassica napus cDNA 3', mRNA sequence.
ES271555.1:273-292
GGTGAAGAGCAAGACGATGGAGATGACTCG273TCTTCTTCGCCGATCTTTGCATCGTCTCCTGCAGGATCATGGAGTTGTCA
BNAPO4GH_T3_034_G03_20JULY2007_019 BNAPO4GH Brassica napus cDNA 5', mRNA sequence.
GR461707.1:203-222
GGTGAAGAGCAAGACGATGGAGATGACTCG203TCTTCTTCGCCGATCTTTGCATCGTCTCCTGCAGGATCATGGAGTTGTCA
JBnY031C18F Brassica napus BAC library JBnY Brassica napus genomic clone JBnY031C18, genomic survey sequence.
DU100811.1:605-624
GGTGAAGAGCAAGACGATGGAGATGACTCG605TCTTCTTCGCCGATCTTTGCATCGTCTCCTGCAGGATCATGGAGTTGTCA
Brassica rapa subsp. pekinensis clone KBrB041F20, complete sequence.
CU984550.1:116907-116926
GGTGAAGAGCAAGACGATGGAGATGACTCG116907TCTTCTTCGCCGATCTTTGCATCGTCTCCTGCAGGATCATGGAGTTGTCA
Brassica napus genome assembly, chromosome: A08.
HG994362.1:12621353-12621372
GGTGAAGAGCAAGACGATGGAGATGACTCG12621353TCTTCTTCGCCGATCTTTGCATCGTCTCCTGCAGGATCATGGAGTTGTCA
Brassica rapa genome, scaffold: A08.
LR031575.1:11620933-11620952
GGTGAAGAGCAAGACGATGGAGATGACTCG11620933TCTTCTTCGCCGATCTTTGCATCGTCTCCTGCAGGATCATGGAGTTGTCA
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:19438990-19439009
GGTGAAGAGCAAGACGATGGAGATGACTCG19438990TCTTCTTCGCCGATCTTTGCATCGTCTCCTGCAGGATCATGGAGTTGTCA
Brassica rapa genome assembly, chromosome: A08.
LS974624.2:17429195-17429214
GGTGAAGAGCAAGACGATGGAGATGACTCG17429195TCTTCTTCGCCGATCTTTGCATCGTCTCCTGCAGGATCATGGAGTTGTCA
Ailanthus altissima genome assembly, chromosome: 4.
OX327686.1:4968756-4968775
CGTCGTCCGTTCGCTGGTGGGTTGCCGTAC4968756TCTTCTTCGCCGATCTTTGCTATTTCCCCGTCTGCTCTTTTGCACCGGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAAAGATCGGCGAAGAAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAAAGATCGGCGAAGAAGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.299 | 0.291 | search_plus_done; http://172.18.8.135:50400/match?q=GCAAAGATCGGCGAAGAAGA&k=0&no_gap=0&offset=0&limit=50
0.749 | 0.449 | search_minus_done; http://172.18.8.135:50400/match?q=TCTTCTTCGCCGATCTTTGC&k=0&no_gap=0&offset=0&limit=42
0.756 | 0.008 | cgi_end;

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