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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 12:06:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:7556063-7556084
ATTGACGATAAGCAAAACAAATTACGAAAA7556063GCAAAGTAATCAAACAGCCAAAAAATTAGAATGAAATCCTAAAACATTCTCA
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:7242409-7242430
ATTGACGATAAGCAAAACAAATTACGAAAA7242409GCAAAGTAATCAAACAGCCAAAAAATTAGAATGAAATCCTAAAACATTCTCA
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:7335110-7335131
ATTGACGATAAGCAAAACAAATTACGAAAA7335110GCAAAGTAATCAAACAGCCAAAAAATTAGAATGAAATCCTAAAACATTCTCA
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:8631486-8631507
ATTGACGATAAGCAAAACAAATTACGAAAA8631486GCAAAGTAATCAAACAGCCAAAAAGTTAGAATGAAATCCTAAAACATTCTCA
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:8915636-8915657
ATTGACGATAAGCAAAACAAATTACGAAAA8915636GCAAAGTAATCAAACAGCCAAAAAATTAGAATGAAATCCTAAAACATTCTCA
Mdfw2065b10.y4 Mdfw Malus domestica cDNA clone Mdfw2065b10 5', mRNA sequence.
CO416408.1:214-235
TGAGAATGTTTTAGGATTTCATTCTAATTA214TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCAAT
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:28149214-28149235
TGAGAATGTTTTAGGATTTCATTCTAATTT28149214TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCAAT
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:28513205-28513226
TGAGAATGTTTTAGGATTTCATTCTAATTT28513205TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCAAT
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:28600865-28600886
TGAGAATGTTTTAGGATTTCATTCTAATTT28600865TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCAAT
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:29558523-29558544
TGAGAATGTTTTAGGATTTCATTCTAATTT29558523TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCAAT
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:30547172-30547193
TGAGAATGTTTTAGGATTTCATTCTAATTT30547172TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCATT
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:30635281-30635302
TGAGAATGTTTTAGGATTTCATTCTAATTT30635281TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCAAT
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:30738049-30738070
TGAGAATGTTTTAGGATTTCATTCTAATTT30738049TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCAAT
Malus domestica genome assembly, chromosome: 2.
OU696678.1:30259557-30259578
TGAGAATGTTTTAGGATTTCATTCTAATTT30259557TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCATT
Malus domestica genome assembly, chromosome: 2.
OU696678.1:30347645-30347666
TGAGAATGTTTTAGGATTTCATTCTAATTT30347645TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCAAT
Malus domestica genome assembly, chromosome: 2.
OU696678.1:30442025-30442046
TGAGAATGTTTTAGGATTTCATTCTAATTT30442025TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCAAT
Malus domestica genome assembly, chromosome: 2.
OU744543.1:30559626-30559647
TGAGAATGTTTTAGGATTTCATTCTAATTT30559626TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCAAT
Malus domestica genome assembly, chromosome: 2.
OU744543.1:30635236-30635257
TGAGAATGTTTTAGGATTTCATTATAATTT30635236TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGTTTTGCTTATCG
Malus domestica genome assembly, chromosome: 2.
OU744954.1:30015794-30015815
TGAGAATGTTTTAGGATTTCATTCTAATTT30015794TTTGGCTGTTTGATTACTTTGCTTTTTGTAATTTGTTTTGCTTATCGTCTCA
Malus domestica genome assembly, chromosome: 2.
OU744954.1:30127089-30127110
TGAGAATGTTTTAGGATTTCATTCTAATTT30127089TTTGGCTGTTTGATTACTTTGCTTTTCGTAATTTGTTTTGCTTATCGTCAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAAAGTAATCAAACAGCCAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAAAGTAATCAAACAGCCAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.175 | 0.166 | search_plus_done; http://172.18.8.135:50400/match?q=GCAAAGTAATCAAACAGCCAAA&k=0&no_gap=0&offset=0&limit=50
0.315 | 0.141 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGGCTGTTTGATTACTTTGC&k=0&no_gap=0&offset=0&limit=45
0.325 | 0.010 | cgi_end;

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