GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-20 07:57:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

T110504e KV0 Medicago truncatula cDNA clone pKV0-1K6, mRNA sequence.
AI974550.1:16-37
TGTTTATGTTTTATA16GCAACCGCTTTATTACATTGTCTCCTTCTTCTTCTTCTTCTTATTCTTCAAA
METAT90TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY476666.1:29-50
GGGTTGGGTTATTTGTTTATGTTTTATA29GCAACCGCTTTATTACATTGTCTCCTTCTTCTTCTTCTTCTTATTCTTCAAA
Medicago truncatula clone mth2-36h10, complete sequence.
AC128638.34:108302-108323
TCTTGTTGGGTTATTTGTTTATGTTTTATA108302GCAACCGCTTTATTACATTGTCTCCTTCTTCTTCTTCTTCTTATTCTTCAAA
Medicago truncatula chromosome 7 clone mth2-26k20, complete sequence.
AC155887.2:1461-1482
TCTTGTTGGGTTATTTGTTTATGTTTTATA1461GCAACCGCTTTATTACATTGTCTCCTTCTTCTTCTTCTTCTTATTCTTCAAA
Medicago lupulina genome assembly, chromosome: 2.
OY283140.1:7267891-7267912
TCTTGTTGCGTTATTTGTTTATGTTTTATA7267891GCAACCGCTTTATTACATTGTCTCCTTCTCCTTCTTCTTCTTATTCTTTAAA
MBENH73TR mth2 Medicago truncatula genomic clone 7N2, genomic survey sequence.
CG954567.1:743-764
TTTGAAGAATAAGAAGAAGAAGAAGAAGGA743GACAATGTAATAAAGCGGTTGCTATAAAACATAAACAAATAACCCAACAAGA
Medicago arabica genome assembly, chromosome: 6.
OX326969.1:52719208-52719229
GTAGAATAAGAAGAAGAAGAAGAAGAAGGA52719208GACAATGTAATAAAGCGGTTGCTATAAAACATAAACAAATAACGCAACAAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCAACCGCTTTATTACATTGTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAACCGCTTTATTACATTGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.152 | 0.144 | search_plus_done; http://172.18.8.135:50400/match?q=GCAACCGCTTTATTACATTGTC&k=0&no_gap=0&offset=0&limit=50
0.181 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=GACAATGTAATAAAGCGGTTGC&k=0&no_gap=0&offset=0&limit=45
0.182 | 0.001 | cgi_end;

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