GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 08:37:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Manihot esculenta mRNA, clone: CAS01_036_J11, 5'end.
DB932929.1:508-529
GAGAAAACCTTGACCATCTGCAGAGAGCCA508GCAAGCACCAGCAACAGACTCAACCCAAGAAAAGGGTGGCTCCTGTTGCCCC
U_UZ-100602_plate40l16.b1 Full-length enriched cDNA library of cassava MPER417-003 Manihot esculenta subsp. peruviana cDNA, mRNA sequence.
JK000667.1:248-269
AGAGAAACCTTGACCATCTGCAGAGAGCCA248GCAAGCACCAGCAACAGACTCAACCCAAGAAAAGGGTGGCTCCTGTTGCCCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GCAAGCACCAGCAACAGACTCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAAGCACCAGCAACAGACTCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.240 | 0.231 | search_plus_done; http://172.18.8.135:50400/match?q=GCAAGCACCAGCAACAGACTCA&k=0&no_gap=0&offset=0&limit=50
0.255 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=TGAGTCTGTTGCTGGTGCTTGC&k=0&no_gap=0&offset=0&limit=48
0.255 | 0.000 | cgi_end;

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