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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:55:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Cannabis sativa PK04793.1_1.CasaPuKu mRNA sequence.
JP449783.1:2161-2180
GTCCACCGGTCCAGAGGAGAGATATTGGAA2161GCAAGGAGTAAAGCTTTTGGCGAAACCTGTAGCAGTTGGAATAGAAGGAT
TSA: Cannabis sativa PK04793.3_1.CasaPuKu mRNA sequence.
JP457775.1:1085-1104
GTCCACTGGTCCAGAGGAGAGATATTGGAA1085GCAAGGAGTAAAGCTTTTGGCGAAACCTGT
Humulus lupulus genome assembly, chromosome: 5.
OY720652.1:244171108-244171127
TATTCTGATGTCAGATGAGAGATATTGGAA244171108GCAAGGAGTAAAGCTTTTGGCCACACCTGCGGCAGTTGGAATAGAAGGAT
Anaerocolumna sp. AGMB13025 chromosome, complete genome.
CP121445.1:1778290-1778309
GTTTGGAGATACTTTGATCTATATAACAAA1778290CCAAAAGCTTTACTCCTTGCAGTATCTGCTCTATGTATACATTAACCAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAAGGAGTAAAGCTTTTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAAGGAGTAAAGCTTTTGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.176 | 0.168 | search_plus_done; http://172.18.8.135:50400/match?q=GCAAGGAGTAAAGCTTTTGG&k=0&no_gap=0&offset=0&limit=50
0.263 | 0.087 | search_minus_done; http://172.18.8.135:50400/match?q=CCAAAAGCTTTACTCCTTGC&k=0&no_gap=0&offset=0&limit=47
0.264 | 0.001 | cgi_end;

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