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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 16:21:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Orcinus orca genome assembly, chromosome: 9.
OW443369.1:76278014-76278033
AGGGCTTTTCTTTTCTTTTTGAGGTCGGAT76278014GCAAGGTTATATGTTGAGAGTGAAGGGACTGAGCTTTAGCATATGGCTTG
Lagenorhynchus albirostris genome assembly, chromosome: 8.
OX459080.1:76177792-76177811
AGGGCTTTGCTTTTCTTTTTGAGGTCGGAT76177792GCAAGGTTATATGTTGAGAGTGAAGGGACTGAGCGTTAGCATATGGCTTG
Balaenoptera acutorostrata genome assembly, chromosome: 7.
OX465357.1:78807002-78807021
AGGGCTTTTCTTTTCCTTTTGAGGTTGGAT78807002GCAAGGTTATATGTTGAGAGTGAAGGGACTGAGCTTTAGCATATGGCTTG
Globicephala melas genome assembly, chromosome: 9.
OY734048.1:76005551-76005570
AGGGCTTTTCTTTTCTTTTTGAGGTCGGAT76005551GCAAGGTTATATGTTGAGAGTGAAGGGACTGAGCTTTAGCATATGGCTTG
Hyperoodon ampullatus genome assembly, chromosome: 9.
OX457064.1:32021501-32021520
CAAGCCATATGCTAAAGCTCAGTCCCTTCA32021501CTCTCAACATATAACCTTGCATCCGACCTCAAAAAGAAAAGAAAAGCCCT
Delphinus delphis genome assembly, chromosome: 9.
OX465335.1:31222145-31222164
CAAGCCATATGCTAAAGCTCAGTCCCTTCA31222145CTCTCAACATATAACCTTGCATCCGACCTCAAAAAGAAAAGAAAAGAAAA
Stenella coeruleoalba genome assembly, chromosome: 9.
OX596394.1:29171412-29171431
CAAGCCATATGCTAAAGCTCAGTCCCTTCA29171412CTCTCAACATATAACCTTGCATCCGACCTCAAAAAGAAAAGAAAAGAAAA
Phocoena phocoena genome assembly, chromosome: 9.
OZ004766.1:29555012-29555031
CAAGCCATATGCTAAATCTCAGTCCCTTCA29555012CTCTCAACATATAACCTTGCATCCGACCTCAAAAAGAAAAGAAAAGCCCT
Alitta virens genome assembly, chromosome: 1.
OW028573.1:54782477-54782496
TTATGATTTTGATCGATTTAAACCTAAATA54782477CTCTCAACATATAACCTTGCAAACTTAATTATCACAGGCTTACACTTGCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCAAGGTTATATGTTGAGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCAAGGTTATATGTTGAGAG | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.163 | 0.155 | search_plus_done; http://172.18.8.135:50400/match?q=GCAAGGTTATATGTTGAGAG&k=0&no_gap=0&offset=0&limit=50
0.252 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTCAACATATAACCTTGC&k=0&no_gap=0&offset=0&limit=46
0.255 | 0.003 | cgi_end;

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