GGGenome | Results

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2025-04-12 16:54:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Neolamprologus multifasciatus genome assembly, chromosome: 12.
OY755025.1:3296767-3296786

TGGTTAGCATTCATCTCTTTGAACCTGAGA3296767GCAAGTTTTACCGGTCTATTTCTCGGTTGGTTGGTTTTTGGGACTCTGCT

Astatotilapia calliptera genome assembly, chromosome: 12.
LS420030.2:34660905-34660924

AGCAGAGTCCCAAAAACCAACCAACCAAGA34660905AATAGACCGGTAAAACTTGCTCTCAGGTTCAAAGAGATGAATGCTAACCA

Brassica rapa genome, scaffold: A03.
LR031572.1:9173004-9173023

TTGCACATGACTTCTATTTTAATAGTATAG9173004AATAGACCGGTAAAACTTGCGAACCGATTATTTAGGGATGGTACTGTTCA

Brassica rapa genome assembly, chromosome: A03.
LS974619.2:9295476-9295495

TTGCACATGACTTCTATTTTAATAGTATAG9295476AATAGACCGGTAAAACTTGCGAACCGATTATTTAGGGATGGTACTGTTCA

Ligdia adustata genome assembly, chromosome: 2.
OX346215.1:15087358-15087377

AATATGCATGTCCCTTCCAAATATTACTAA15087358AATAGACCGGTAAAACTTGCACAGTTTATGGAAGAATTACGCAACCATTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.114 | 0.105 | search_plus_done; http://172.18.8.135:50400/match?q=GCAAGTTTTACCGGTCTATT&k=0&no_gap=0&offset=0&limit=50
0.149 | 0.035 | search_minus_done; http://172.18.8.135:50400/match?q=AATAGACCGGTAAAACTTGC&k=0&no_gap=0&offset=0&limit=49
0.152 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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