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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 16:08:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sylvilagus floridanus genome assembly, chromosome: 4.
OX463226.1:104877216-104877235
GATAGACGGAGCTGGGCCAAGAGAGCAACT104877216GCACAAAGCATCCTTCAACACTGTTAGCTGGGCACCTACTATATGCCATG
Sequence 17047 from patent US 9029636.
HK926110.1:865-884
GAAGCTTATGTGTGTGGTGCAATAGCTCTA865GCACAAAGCATCCTTCAACACAACAACAACAACAACAACAACAACAACAA
sr09f06.y1 Gm-c1049 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1049-2172 5' similar to TR:O80649 O80649 T14N5.1 PROTEIN, mRNA sequence.
BE801128.1:59-78
GAAGCTTATGTGTGTGGTGCAATAGCTCTA59GCACAAAGCATCCTTCAACACAACAACAACAACAACAACAACAACAACAA
fbnb004e009c03f0 Brassica napus methylation filtered library (LibID: 147) Brassica napus genomic, genomic survey sequence.
CZ887542.1:201-220
GAAGCTTATGTGTGTGGTGCAATAGCTCTA201GCACAAAGCATCCTTCAACACAACAACAACAACAACAACAACAACAACAA
GT_DBa167N02.F GT_DBa Glycine tomentella genomic 5', genomic survey sequence.
HN637129.1:24-43
ATGTGTGTGGTGCAATAGCTCTA24GCACAAAGCATCCTTCAACACAACAACAACTACACCAAATTAGACCTACT
37189 Glycine max young leaves DNA Glycine max STS genomic, sequence tagged site.
GF094103.1:10-29
ATAGCTCTA10GCACAAAGCATCCTTCAACACAACAACAACAACAACAACAACAACAACAA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:52695827-52695846
GAAGCTTATGTTTGTGGTGCAATAGCTCTA52695827GCACAAAGCATCCTTCAACATAACATCAGCTACACCACAGACCTTCTTCT
Sambucus nigra genome assembly, chromosome: 4.
OX422210.1:554761425-554761444
CCTTACATATGTTTTACTTGTTTATTCAAA554761425GCACAAAGCATCCTTCAACACCCCACATATCTTTTTATCATGTCCTCAAT
Ulota crispa genome assembly, chromosome: 7.
OY987248.1:18260339-18260358
TCAATGATCAAAGAATCTTTTATCCAAAGT18260339GCACAAAGCATCCTTCAACAAAGATGCTATGCAAAATTGTTCAATTATAA
Hermetia illucens genome assembly, chromosome: 1.
LR899009.1:155894434-155894453
GGTACACTCTTGAGGCTTCCTTAATTTCTA155894434GCACAAAGCATCCTTCAACACGAACGGTCAGCTCTTTTCGCTAGTTCTTA
Bruchidius siliquastri genome assembly, chromosome: 3.
OX438531.1:13253697-13253716
TCCCTAACCTAAAGGAATCGACATTACATG13253697GCACAAAGCATCCTTCAACAATTTGTCCAAATCCATTTGCTGCATTTACA
Glycine max DNA, BAC clone: GMJENb0048K23_R, 3'end, cultivar: ENREI.
LB163526.1:95-114
AATTTGGTGTAGTTGTTGTTGTTGTTGTTG95TGTTGAAGGATGCTTTGTGCTAGAGCTATTGCACCACACACAT
Glycine max cultivar Williams 82 chromosome 10.
CP126435.1:42619181-42619200
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTG42619181TGTTGAAGGATGCTTTGTGCTAGAGCTATTGCACCACACACATAAGCTTC
Orthonevra nobilis genome assembly, chromosome: 1.
OY743224.1:131067605-131067624
CCTTATATATGCCTCGTGCTACGATGGACG131067605TGTTGAAGGATGCTTTGTGCTGAGTCACACGTGAAATTCCGGCAAAAAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCACAAAGCATCCTTCAACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACAAAGCATCCTTCAACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.368 | 0.360 | search_plus_done; http://172.18.8.135:50400/match?q=GCACAAAGCATCCTTCAACA&k=0&no_gap=0&offset=0&limit=50
0.557 | 0.189 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTGAAGGATGCTTTGTGC&k=0&no_gap=0&offset=0&limit=39
0.559 | 0.002 | cgi_end;

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