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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:26:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-7512 Pericarp Coffea canephora cDNA clone cccp5b9 5', mRNA sequence.
DV672087.1:225-251
TTTGCAAATCTGTCAGCAGATCGGTGAGGT225TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CGN-10194 Pericarp Coffea canephora cDNA clone cccp10d2 5', mRNA sequence.
DV673913.1:225-251
TTTGCAAATCTGTCAGCAGATCGGTGAGGT225TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CGN-51550 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w15l16 5', mRNA sequence.
DV704696.1:75-101
TTTGCAAATCTGTCAGCAGATCGGTGAGGT75TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CGN-51623 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w3p10 5', mRNA sequence.
DV704755.1:75-101
TTTGCAAATCTGTCAGCAGATCGGTGAGGT75TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CGN-53503 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w11p2 5', mRNA sequence.
DV706185.1:75-101
TTTGCAAATCTGTCAGCAGATCGGTGAGGT75TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CGN-53620 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w17l16 5', mRNA sequence.
DV706272.1:75-101
TTTGCAAATCTGTCAGCAGATCGGTGAGGT75TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CGN-54380 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w16b10 5', mRNA sequence.
DV706836.1:341-367
TTTGCAAATCTGTCAGCAGATCGGTGAGGT341TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CGN-57535 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w18o12 5', mRNA sequence.
DV709273.1:75-101
TTTGCAAATCTGTCAGCAGATCGGTGAGGT75TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CGN-58441 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w22o12 5', mRNA sequence.
DV709999.1:76-102
TTGCAAATCTGTCAGCAGATCGGTTGAGGT76TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CGN-59110 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w29b13 5', mRNA sequence.
DV710550.1:341-367
TTTGCAAATCTGTCAGCAGATCGGTGAGGT341TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
TransId-80475 CACAT36FLBUD Coffea arabica cDNA clone CACAT36FLBUD_Q3_06_67C09.F similar to Symbol: None | lactoylglutathione lyase family protein / glyoxalase I family protein, contains glyoxalase fam
GR983019.1:340-366
TTTGCAAATCTGTCAGCAGATCGGTGAGGT340TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
TransId-79450 CACAT36FLBUD Coffea arabica cDNA clone CACAT36FLBUD_Q2_04_E20_309.F similar to Symbol: None | lactoylglutathione lyase family protein / glyoxalase I family protein, contains glyoxalase f
GR983464.1:347-373
TTTGCAAATCTGTCAGCAGATCGGTGAGGT347TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
TransId-95949 CACAT36MER Coffea arabica cDNA clone CACAT36MER_Q3_08_08H01.F similar to Symbol: None | lactoylglutathione lyase family protein / glyoxalase I family protein, contains glyoxalase family
GR989211.1:346-372
TTTGCAAATCTGTCAGCAGATCGGTGAAGT346TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
TransId-228490 CACATN1 Coffea arabica cDNA clone CACATN1-9093TV similar to Glyoxalase/bleomycin resistance protein/dioxygenase - Medicago truncatula (Barrel medic), mRNA sequence.
GR993597.1:357-383
TTTGCAAATCTGTCAGCAGATCGGTGAGGT357TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CA00-XX-FR1-065-D06-AB.F Coffea arabica FR1 Coffea arabica cDNA clone CA00-XX-FR1-065-D06-AB, mRNA sequence.
GT714855.1:284-310
TTTGCAAATCTGTCAGCAGATCGGTGAGGT284TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CA00-XX-BP1-115-H03-CB.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-115-H03-CB, mRNA sequence.
GT722398.1:311-337
TTTGCAAATCTGTCAGCAGATCGGTGAGGT311TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CA00-XX-RT8-028-H11-QH.F Coffea arabica RT8 Coffea arabica cDNA clone CA00-XX-RT8-028-H11-QH, mRNA sequence.
GT728747.1:339-365
TTTGCAAATCTGTCAGCAGATCGGTGAGGT339TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG
CA00-XX-RT8-058-D06-EZ.F Coffea arabica RT8 Coffea arabica cDNA clone CA00-XX-RT8-058-D06-EZ, mRNA sequence.
GT728748.1:317-343
TTTGCAAATCTGTCAGCAGATCGGTGAGGT317TCTATGAGGAAGTACTGGGATTTGTGCTCATTAAAAGGCCTTCTTCTTTCGACTTCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCACAAATCCCAGTACTTCCTCATAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACAAATCCCAGTACTTCCTCATAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.175 | 0.166 | search_plus_done; http://172.18.8.135:50400/match?q=GCACAAATCCCAGTACTTCCTCATAGA&k=0&no_gap=0&offset=0&limit=50
1.822 | 1.648 | search_minus_done; http://172.18.8.135:50400/match?q=TCTATGAGGAAGTACTGGGATTTGTGC&k=0&no_gap=0&offset=0&limit=50
1.834 | 0.012 | cgi_end;

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