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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:38:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 4 from Patent WO2009042753.
GN337402.1:922-948
TGGTTCAGTTTATGGGTTAAACCACAATTT922GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 5 from Patent WO2009042753.
GN337403.1:922-948
TGGTTCAGTTTATGGGTTAAACCACAATTT922GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 6 from Patent WO2009042753.
GN337404.1:179-205
TGGTTCAGTTTATGGGTTAAACCACAATTT179GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 7 from Patent WO2009042753.
GN337405.1:1-27
1GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 12 from Patent WO2009042753.
GN337410.1:922-948
TGGTTCAGTTTATGGGTTAAACCACAATTT922GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 13 from Patent WO2009042753.
GN337411.1:922-948
TGGTTCAGTTTATGGGTTAAACCACAATTT922GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 14 from Patent WO2009042753.
GN337412.1:179-205
TGGTTCAGTTTATGGGTTAAACCACAATTT179GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 15 from Patent WO2009042753.
GN337413.1:1-27
1GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 4 from patent US 8198510.
GZ354083.1:922-948
TGGTTCAGTTTATGGGTTAAACCACAATTT922GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 5 from patent US 8198510.
GZ354084.1:922-948
TGGTTCAGTTTATGGGTTAAACCACAATTT922GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 6 from patent US 8198510.
GZ354085.1:179-205
TGGTTCAGTTTATGGGTTAAACCACAATTT179GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 7 from patent US 8198510.
GZ354086.1:1-27
1GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 12 from patent US 8198510.
GZ354090.1:922-948
TGGTTCAGTTTATGGGTTAAACCACAATTT922GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 13 from patent US 8198510.
GZ354091.1:922-948
TGGTTCAGTTTATGGGTTAAACCACAATTT922GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 14 from patent US 8198510.
GZ354092.1:179-205
TGGTTCAGTTTATGGGTTAAACCACAATTT179GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 15 from patent US 8198510.
GZ354093.1:1-27
1GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 3 from Patent WO2010054348.
HC882456.1:859-885
TGGTTCAGTTTATGGGTTAAACCACAATTT859GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 4 from Patent WO2010054348.
HC882457.1:859-885
TGGTTCAGTTTATGGGTTAAACCACAATTT859GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 5 from Patent WO2010054348.
HC882458.1:859-885
TGGTTCAGTTTATGGGTTAAACCACAATTT859GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATAATATAAACCT
Sequence 6 from Patent WO2010054348.
HC882459.1:894-920
TGGTTCAGTTTATGGGTTAAACCACAATTT894GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATAATATAAACCT
Sequence 7 from Patent WO2010054348.
HC882460.1:894-920
TGGTTCAGTTTATGGGTTAAACCACAATTT894GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATAATATAAACCT
Sequence 13 from Patent WO2010054348.
HC882466.1:906-932
TGGTTCAGTTTATGGGTTAAACCACAATTT906GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 3 from patent US 9133467.
HL197181.1:859-885
TGGTTCAGTTTATGGGTTAAACCACAATTT859GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 4 from patent US 9133467.
HL197182.1:859-885
TGGTTCAGTTTATGGGTTAAACCACAATTT859GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 5 from patent US 9133467.
HL197183.1:859-885
TGGTTCAGTTTATGGGTTAAACCACAATTT859GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATAATATAAACCT
Sequence 6 from patent US 9133467.
HL197184.1:894-920
TGGTTCAGTTTATGGGTTAAACCACAATTT894GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATAATATAAACCT
Sequence 7 from patent US 9133467.
HL197185.1:894-920
TGGTTCAGTTTATGGGTTAAACCACAATTT894GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATAATATAAACCT
Sequence 13 from patent US 9133467.
HL197191.1:906-932
TGGTTCAGTTTATGGGTTAAACCACAATTT906GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 1 from Patent WO2012097128.
JC184593.1:195-221
TGGTTCAGTTTATGGGTTAAACCACAATTT195GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Sequence 3 from Patent WO2012097128.
JC184595.1:257-283
TGGTTCAGTTTATGGGTTAAACCACAATTT257GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:129078705-129078731
TGGTTCAGTTTATGGGTTAAACCACAATTT129078705GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:129919016-129919042
TGGTTCAGTTTATGGGTTAAACCACAATTT129919016GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Capsicum annuum cultivar ECW Bs3-E (Bs3-E) gene, complete cds.
EU078683.1:859-885
TGGTTCAGTTTATGGGTTAAACCACAATTT859GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT
Capsicum annuum cultivar ECW-30R Bs3 (Bs3) gene, complete cds.
EU078684.1:859-885
TGGTTCAGTTTATGGGTTAAACCACAATTT859GCACACCCTGGTTAAACAATGAACACGTTTGCCTGACCAATTTTATTATATAAACCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GCACACCCTGGTTAAACAATGAACACG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GCACACCCTGGTTAAACAATGAACACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.806 | 0.797 | search_plus_done; http://172.18.8.135:50400/match?q=GCACACCCTGGTTAAACAATGAACACG&k=0&no_gap=0&offset=0&limit=50
0.916 | 0.110 | search_minus_done; http://172.18.8.135:50400/match?q=CGTGTTCATTGTTTAACCAGGGTGTGC&k=0&no_gap=0&offset=0&limit=16
0.916 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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